Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 HSPD1P1-201ENST00000503199 1726 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 RNA5SP114-201ENST00000363780 113 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 UBBP1-201ENST00000392399 473 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 BX276092.6-201ENST00000430476 250 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC013403.1-201ENST00000436954 263 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 SNRPBP1-201ENST00000443634 282 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 RPL7P14-201ENST00000449851 741 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC019080.2-201ENST00000453859 394 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 BX276092.8-201ENST00000455722 250 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC008620.1-201ENST00000468453 592 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC099340.1-201ENST00000475247 599 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 RPS26P24-201ENST00000497656 331 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 GAPDHP38-201ENST00000503632 1002 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 RNA5SP318-201ENST00000516352 92 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 COX6B1P4-201ENST00000519826 484 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 BMS1P8-201ENST00000565049 1178 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 NDUFA3P1-201ENST00000588007 252 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 COX6CP16-201ENST00000603667 216 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC073488.9-201ENST00000631601 754 ntBASIC4.67□□□□□ -1.66
NUP35Q8NFH5 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP35Q8NFH5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC239868.2-201ENST00000564237 4527 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC020656.2-201ENST00000613291 5309 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 U3.10-201ENST00000364459 214 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 GYG1P2-201ENST00000426437 1006 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC009518.3-201ENST00000438972 253 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 RPL29P7-201ENST00000440227 457 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 MED28P7-201ENST00000456611 530 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 RN7SL308P-201ENST00000464971 297 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 RN7SL390P-201ENST00000470634 284 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 TUBBP11-201ENST00000472255 252 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 RN7SL282P-201ENST00000479676 297 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 TRBV5-2-201ENST00000489095 273 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 GOLGA5P1-201ENST00000507317 980 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 ASNSP4-201ENST00000511103 447 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 SCARNA5-201ENST00000516201 276 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AL049869.4-201ENST00000555669 178 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AL049779.3-201ENST00000557141 606 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 MIR4262-201ENST00000578394 54 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC139792.1-201ENST00000607051 647 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 AC093635.1-201ENST00000609028 555 ntBASIC4.66□□□□□ -1.66
NUP35Q8NFH5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms