Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL133445.1-201ENST00000467051 452 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC004453.1-201ENST00000487895 408 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC020937.1-201ENST00000519677 1013 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 MRPS16P1-201ENST00000523462 412 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 OR7A11P-201ENST00000597719 953 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 RBMY1HP-201ENST00000382759 1389 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC241952.1-201ENST00000612480 6897 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 RPL26P29-201ENST00000415623 438 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC005297.1-201ENST00000444765 862 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC023245.1-201ENST00000468501 517 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 OR6M2P-201ENST00000529831 871 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC092375.1-201ENST00000550410 637 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC096996.1-201ENST00000563813 325 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 MRRFP1-201ENST00000435941 1675 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 OR8B9P-202ENST00000642028 5216 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 MXRA5Y-201ENST00000420610 8000 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AL360081.1-201ENST00000428299 555 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 SALL4P7-201ENST00000555779 3120 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AL355377.1-201ENST00000621125 1653 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 FGF5-203ENST00000456523 5234 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC096921.2-201ENST00000561507 1916 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 SNRPEP6-201ENST00000407465 277 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC108075.1-201ENST00000424692 529 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
VPS13CQ709C8 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 FO393409.1-201ENST00000399325 1372 ntBASIC4.89□□□□□ -1.63
VPS13CQ709C8 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS13CQ709C8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 RNA5SP156-201ENST00000410250 110 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL139415.1-201ENST00000424862 352 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AURKAPS1-201ENST00000451805 1212 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms