Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.02□□□□□ -1.45
LTBQ06643 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 AC093816.1-201ENST00000515076 913 ntBASIC6.02□□□□□ -1.45
LTBQ06643 IGKV2D-38-201ENST00000518423 240 ntBASIC6.02□□□□□ -1.45
LTBQ06643 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.02□□□□□ -1.45
LTBQ06643 SNRPCP6-201ENST00000528310 210 ntBASIC6.02□□□□□ -1.45
LTBQ06643 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.02□□□□□ -1.45
LTBQ06643 AL445383.1-201ENST00000554689 874 ntBASIC6.02□□□□□ -1.45
LTBQ06643 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.02□□□□□ -1.45
LTBQ06643 AC005726.4-201ENST00000582858 458 ntBASIC6.02□□□□□ -1.45
LTBQ06643 NF1P10-201ENST00000613227 742 ntBASIC6.02□□□□□ -1.45
LTBQ06643 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.02□□□□□ -1.45
LTBQ06643 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.02□□□□□ -1.45
LTBQ06643 AC022400.9-201ENST00000623633 273 ntBASIC6.02□□□□□ -1.45
LTBQ06643 AC005858.3-201ENST00000624756 589 ntBASIC6.02□□□□□ -1.45
LTBQ06643 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 AL121936.2-201ENST00000641935 662 ntBASIC6.02□□□□□ -1.45
LTBQ06643 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
LTBQ06643 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.02□□□□□ -1.45
LTBQ06643 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LTBQ06643 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.02□□□□□ -1.45
LTBQ06643 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LTBQ06643 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
LTBQ06643 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 AL137918.1-201ENST00000624542 1922 ntBASIC6.01□□□□□ -1.45
LTBQ06643 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 AL359694.2-201ENST00000567753 1615 ntBASIC6.01□□□□□ -1.45
LTBQ06643 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 UBBP1-201ENST00000392399 473 ntBASIC6.01□□□□□ -1.45
LTBQ06643 AL359694.1-201ENST00000403247 604 ntBASIC6.01□□□□□ -1.45
LTBQ06643 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 RPLP1P10-201ENST00000413972 339 ntBASIC6.01□□□□□ -1.45
LTBQ06643 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.01□□□□□ -1.45
LTBQ06643 MTND2P15-201ENST00000418575 892 ntBASIC6.01□□□□□ -1.45
LTBQ06643 TRGV5P-201ENST00000419915 354 ntBASIC6.01□□□□□ -1.45
LTBQ06643 SETP10-201ENST00000424368 814 ntBASIC6.01□□□□□ -1.45
LTBQ06643 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.01□□□□□ -1.45
LTBQ06643 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.01□□□□□ -1.45
LTBQ06643 RPL26P30-201ENST00000453533 435 ntBASIC6.01□□□□□ -1.45
LTBQ06643 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 AP000926.3-201ENST00000497201 299 ntBASIC6.01□□□□□ -1.45
LTBQ06643 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 SNORA58-201ENST00000505219 137 ntBASIC6.01□□□□□ -1.45
LTBQ06643 COL6A4P2-205ENST00000509855 506 ntBASIC6.01□□□□□ -1.45
LTBQ06643 AC091849.1-201ENST00000509920 121 ntBASIC6.01□□□□□ -1.45
LTBQ06643 OR52H2P-201ENST00000514607 902 ntBASIC6.01□□□□□ -1.45
LTBQ06643 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.01□□□□□ -1.45
LTBQ06643 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.01□□□□□ -1.45
LTBQ06643 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.01□□□□□ -1.45
LTBQ06643 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 AL137000.1-201ENST00000610528 1244 ntBASIC6.01□□□□□ -1.45
LTBQ06643 RN7SL261P-201ENST00000613441 282 ntBASIC6.01□□□□□ -1.45
LTBQ06643 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.01□□□□□ -1.45
LTBQ06643 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 SNX18P10-201ENST00000625014 519 ntBASIC6.01□□□□□ -1.45
LTBQ06643 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 AC022034.1-201ENST00000512867 2156 ntBASIC6.01□□□□□ -1.45
LTBQ06643 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.01□□□□□ -1.45
LTBQ06643 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 AC025809.2-201ENST00000625085 1802 ntBASIC6.01□□□□□ -1.45
LTBQ06643 AC217777.1-201ENST00000570034 1471 ntBASIC6.01□□□□□ -1.45
LTBQ06643 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
LTBQ06643 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
LTBQ06643 AL139384.2-201ENST00000613809 3590 ntBASIC6.01□□□□□ -1.45
LTBQ06643 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LTBQ06643 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6□□□□□ -1.45
LTBQ06643 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
LTBQ06643 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
LTBQ06643 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms