Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 MIR199B-201ENST00000384849 110 ntBASIC8.79□□□□□ -1
MSH6P52701 Y_RNA.625-201ENST00000411256 107 ntBASIC8.79□□□□□ -1
MSH6P52701 AC245096.1-201ENST00000413104 546 ntBASIC8.79□□□□□ -1
MSH6P52701 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.79□□□□□ -1
MSH6P52701 AC093155.2-201ENST00000420734 937 ntBASIC8.79□□□□□ -1
MSH6P52701 PSMC1P2-201ENST00000423961 1204 ntBASIC8.79□□□□□ -1
MSH6P52701 BX323845.3-201ENST00000428215 527 ntBASIC8.79□□□□□ -1
MSH6P52701 VN1R110P-201ENST00000438988 971 ntBASIC8.79□□□□□ -1
MSH6P52701 PTMAP6-201ENST00000439110 327 ntBASIC8.79□□□□□ -1
MSH6P52701 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 RN7SL860P-201ENST00000473738 223 ntBASIC8.79□□□□□ -1
MSH6P52701 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC8.79□□□□□ -1
MSH6P52701 AC022206.1-201ENST00000495947 347 ntBASIC8.79□□□□□ -1
MSH6P52701 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.79□□□□□ -1
MSH6P52701 SETP21-201ENST00000514799 892 ntBASIC8.79□□□□□ -1
MSH6P52701 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.79□□□□□ -1
MSH6P52701 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
MSH6P52701 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 AC010998.3-201ENST00000613871 631 ntBASIC8.79□□□□□ -1
MSH6P52701 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
MSH6P52701 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
MSH6P52701 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 RBMY1HP-201ENST00000382759 1389 ntBASIC8.79□□□□□ -1
MSH6P52701 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH6P52701 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
MSH6P52701 BX322650.1-201ENST00000332359 2143 ntBASIC8.78□□□□□ -1
MSH6P52701 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.78□□□□□ -1
MSH6P52701 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 AL008638.3-201ENST00000623027 5182 ntBASIC8.78□□□□□ -1
MSH6P52701 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 RN7SKP162-201ENST00000363605 345 ntBASIC8.78□□□□□ -1
MSH6P52701 U3.7-201ENST00000363668 216 ntBASIC8.78□□□□□ -1
MSH6P52701 AL096711.1-201ENST00000404780 554 ntBASIC8.78□□□□□ -1
MSH6P52701 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.78□□□□□ -1
MSH6P52701 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.78□□□□□ -1
MSH6P52701 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.78□□□□□ -1
MSH6P52701 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.78□□□□□ -1
MSH6P52701 AL035661.1-201ENST00000620459 1144 ntBASIC8.78□□□□□ -1
MSH6P52701 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.78□□□□□ -1
MSH6P52701 CR383656.5-201ENST00000547616 1340 ntBASIC8.78□□□□□ -1
MSH6P52701 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.78□□□□□ -1
MSH6P52701 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 AL034417.4-202ENST00000642135 2236 ntBASIC8.78□□□□□ -1
MSH6P52701 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.78□□□□□ -1
MSH6P52701 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MSH6P52701 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
MSH6P52701 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.77□□□□□ -1
MSH6P52701 AC007342.5-201ENST00000571340 2142 ntBASIC8.77□□□□□ -1
MSH6P52701 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.77□□□□□ -1
MSH6P52701 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 RNU4-34P-201ENST00000410431 124 ntBASIC8.77□□□□□ -1.01
MSH6P52701 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.77□□□□□ -1.01
MSH6P52701 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 RPS27P18-201ENST00000431701 247 ntBASIC8.77□□□□□ -1.01
MSH6P52701 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 AC093270.2-201ENST00000486157 792 ntBASIC8.77□□□□□ -1.01
MSH6P52701 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.77□□□□□ -1.01
MSH6P52701 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.77□□□□□ -1.01
MSH6P52701 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.77□□□□□ -1.01
MSH6P52701 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.77□□□□□ -1.01
MSH6P52701 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.77□□□□□ -1.01
MSH6P52701 AL157899.1-201ENST00000604110 936 ntBASIC8.77□□□□□ -1.01
MSH6P52701 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.77□□□□□ -1.01
MSH6P52701 AL354718.1-201ENST00000619764 589 ntBASIC8.77□□□□□ -1.01
MSH6P52701 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
MSH6P52701 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.77□□□□□ -1.01
MSH6P52701 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MSH6P52701 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.77□□□□□ -1.01
MSH6P52701 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
MSH6P52701 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
MSH6P52701 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MSH6P52701 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MSH6P52701 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MSH6P52701 MORF4L1P5-201ENST00000433352 961 ntBASIC8.76□□□□□ -1.01
MSH6P52701 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms