Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 RPL5P22-201ENST00000480199 884 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.56□□□□□ -1.36
BRCA2P51587 AP000676.2-201ENST00000529711 301 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC245389.2-201ENST00000616023 576 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC242843.1-201ENST00000618702 573 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AL450226.2-201ENST00000622913 439 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 LINC01739-205ENST00000641890 573 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
BRCA2P51587 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 RPL7L1P11-201ENST00000446092 721 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 SNORA58-201ENST00000505219 137 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC147055.3-201ENST00000510547 851 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AP000662.1-201ENST00000530952 487 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC234771.5-201ENST00000600161 514 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
BRCA2P51587 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 AL035555.1-201ENST00000404462 1790 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.56□□□□□ -1.36
BRCA2P51587 PRUNEP1-201ENST00000425846 705 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC092967.1-201ENST00000449016 481 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 RN7SL870P-201ENST00000460111 296 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.56□□□□□ -1.36
BRCA2P51587 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.56□□□□□ -1.36
BRCA2P51587 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.56□□□□□ -1.36
BRCA2P51587 MIR4480-201ENST00000582492 71 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.56□□□□□ -1.36
BRCA2P51587 AC091953.3-201ENST00000623220 236 ntBASIC6.56□□□□□ -1.36
BRCA2P51587 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BRCA2P51587 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
BRCA2P51587 AC020658.2-201ENST00000559030 4020 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
BRCA2P51587 AL023284.3-201ENST00000407767 334 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 AL161722.1-201ENST00000446972 1032 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 AL035090.1-201ENST00000454835 332 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.55□□□□□ -1.36
BRCA2P51587 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BRCA2P51587 AC063949.1-201ENST00000552900 865 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 MIR3934-201ENST00000579806 107 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
BRCA2P51587 AL356317.1-201ENST00000396110 1436 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 AC011504.1-201ENST00000623331 4103 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 MIR433-201ENST00000384837 93 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 AL354868.1-201ENST00000417077 482 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 RPS3AP53-201ENST00000454716 778 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.55□□□□□ -1.36
BRCA2P51587 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.55□□□□□ -1.36
BRCA2P51587 AC134698.5-201ENST00000519444 336 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.55□□□□□ -1.36
BRCA2P51587 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 AC141002.1-201ENST00000607025 279 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 MIR7641-1-201ENST00000627518 61 ntBASIC6.55□□□□□ -1.36
BRCA2P51587 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC6.55□□□□□ -1.36
BRCA2P51587 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BRCA2P51587 OR2M1P-201ENST00000318104 951 ntBASIC6.54□□□□□ -1.36
BRCA2P51587 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.54□□□□□ -1.36
BRCA2P51587 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.54□□□□□ -1.36
BRCA2P51587 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.54□□□□□ -1.36
BRCA2P51587 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms