Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFC3P40938 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.96□□□□□ -1.46
RFC3P40938 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFC3P40938 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFC3P40938 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 LINC01613-201ENST00000561476 2780 ntBASIC5.95□□□□□ -1.46
RFC3P40938 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.95□□□□□ -1.46
RFC3P40938 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RFC3P40938 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 MRPS6P2-201ENST00000381143 370 ntBASIC5.95□□□□□ -1.46
RFC3P40938 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 RNA5SP115-201ENST00000411160 107 ntBASIC5.95□□□□□ -1.46
RFC3P40938 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 GTF2IP14-201ENST00000441415 586 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.95□□□□□ -1.46
RFC3P40938 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 RN7SL552P-201ENST00000462094 276 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 GM2AP2-201ENST00000491764 562 ntBASIC5.95□□□□□ -1.46
RFC3P40938 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 AC122718.2-201ENST00000505325 591 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 MAST4-IT1-201ENST00000514241 658 ntBASIC5.95□□□□□ -1.46
RFC3P40938 RNA5SP418-201ENST00000515951 117 ntBASIC5.95□□□□□ -1.46
RFC3P40938 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC084337.1-201ENST00000524809 686 ntBASIC5.95□□□□□ -1.46
RFC3P40938 BCAS2P1-201ENST00000528022 632 ntBASIC5.95□□□□□ -1.46
RFC3P40938 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.95□□□□□ -1.46
RFC3P40938 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 RPL3P13-201ENST00000550415 216 ntBASIC5.95□□□□□ -1.46
RFC3P40938 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.95□□□□□ -1.46
RFC3P40938 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RFC3P40938 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 AC067852.5-201ENST00000589299 310 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AL356986.1-201ENST00000604085 341 ntBASIC5.95□□□□□ -1.46
RFC3P40938 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC120057.5-201ENST00000623840 154 ntBASIC5.95□□□□□ -1.46
RFC3P40938 AC073593.1-201ENST00000624500 411 ntBASIC5.95□□□□□ -1.46
RFC3P40938 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
RFC3P40938 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFC3P40938 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
RFC3P40938 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.95□□□□□ -1.46
RFC3P40938 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.94□□□□□ -1.46
RFC3P40938 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.94□□□□□ -1.46
RFC3P40938 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RFC3P40938 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RFC3P40938 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 SNORD35A-201ENST00000363389 86 ntBASIC5.94□□□□□ -1.46
RFC3P40938 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.94□□□□□ -1.46
RFC3P40938 SNORA70.9-201ENST00000384370 135 ntBASIC5.94□□□□□ -1.46
RFC3P40938 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RFC3P40938 AL353626.3-201ENST00000413399 657 ntBASIC5.94□□□□□ -1.46
RFC3P40938 OSTCP4-201ENST00000424397 449 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AC083862.1-201ENST00000427378 1242 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.94□□□□□ -1.46
RFC3P40938 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.94□□□□□ -1.46
RFC3P40938 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.94□□□□□ -1.46
RFC3P40938 CCNJP2-201ENST00000457810 1163 ntBASIC5.94□□□□□ -1.46
RFC3P40938 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 AC090888.3-201ENST00000558917 509 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 MIR4271-201ENST00000582451 67 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.94□□□□□ -1.46
RFC3P40938 AL589863.1-201ENST00000595383 631 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.94□□□□□ -1.46
RFC3P40938 AL591926.1-201ENST00000620542 217 ntBASIC5.94□□□□□ -1.46
RFC3P40938 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.94□□□□□ -1.46
RFC3P40938 MRPL57P1-201ENST00000621486 265 ntBASIC5.94□□□□□ -1.46
RFC3P40938 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.94□□□□□ -1.46
RFC3P40938 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.94□□□□□ -1.46
RFC3P40938 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.94□□□□□ -1.46
RFC3P40938 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms