Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP000357.1-201ENST00000409926 1165 ntBASIC8.37□□□□□ -1.07
RFX1P22670 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AL022100.1-202ENST00000421214 548 ntBASIC8.37□□□□□ -1.07
RFX1P22670 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 OR5BE1P-201ENST00000425977 939 ntBASIC8.37□□□□□ -1.07
RFX1P22670 HSPE1P16-201ENST00000426640 348 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AL354941.1-201ENST00000438600 464 ntBASIC8.37□□□□□ -1.07
RFX1P22670 MTCYBP34-201ENST00000439552 670 ntBASIC8.37□□□□□ -1.07
RFX1P22670 MTCYBP3-201ENST00000445588 1137 ntBASIC8.37□□□□□ -1.07
RFX1P22670 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 VN1R32P-201ENST00000452234 905 ntBASIC8.37□□□□□ -1.07
RFX1P22670 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 PTMAP1-205ENST00000455552 325 ntBASIC8.37□□□□□ -1.07
RFX1P22670 NDUFA12P1-201ENST00000455914 406 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 AC013787.1-201ENST00000460165 307 ntBASIC8.37□□□□□ -1.07
RFX1P22670 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 AC109454.1-201ENST00000471205 498 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AC008629.3-201ENST00000505786 586 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AC106774.2-201ENST00000510266 406 ntBASIC8.37□□□□□ -1.07
RFX1P22670 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 AC093755.1-201ENST00000512950 1023 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 RNU6-1308P-201ENST00000516817 103 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 AC134698.4-201ENST00000523451 826 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.37□□□□□ -1.07
RFX1P22670 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.37□□□□□ -1.07
RFX1P22670 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 AL021807.1-201ENST00000607175 565 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC105227.2-201ENST00000615075 605 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC025162.2-201ENST00000619602 560 ntBASIC8.37□□□□□ -1.07
RFX1P22670 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 AC005383.1-201ENST00000622689 534 ntBASIC8.37□□□□□ -1.07
RFX1P22670 AC010653.3-201ENST00000635332 232 ntBASIC8.37□□□□□ -1.07
RFX1P22670 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
RFX1P22670 OR5BE1P-202ENST00000641168 1176 ntBASIC8.37□□□□□ -1.07
RFX1P22670 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.37□□□□□ -1.07
RFX1P22670 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.37□□□□□ -1.07
RFX1P22670 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
RFX1P22670 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 AL512662.1-201ENST00000624850 2251 ntBASIC8.36□□□□□ -1.07
RFX1P22670 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RFX1P22670 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RFX1P22670 RNU6-560P-201ENST00000364007 108 ntBASIC8.36□□□□□ -1.07
RFX1P22670 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 RPL5P35-201ENST00000398869 816 ntBASIC8.36□□□□□ -1.07
RFX1P22670 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 RN7SKP117-201ENST00000410175 264 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AC000362.1-201ENST00000433725 425 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AL354983.1-201ENST00000434580 906 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AC093716.1-201ENST00000435923 377 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AL512882.1-201ENST00000436086 832 ntBASIC8.36□□□□□ -1.07
RFX1P22670 MTND2P40-201ENST00000436718 841 ntBASIC8.36□□□□□ -1.07
RFX1P22670 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms