Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH3P22223 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH3P22223 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH3P22223 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH3P22223 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH3P22223 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDH3P22223 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH3P22223 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH3P22223 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH3P22223 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH3P22223 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH3P22223 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 PPIAP24-201ENST00000328558 471 ntBASIC6.4□□□□□ -1.38
CDH3P22223 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.4□□□□□ -1.38
CDH3P22223 RNA5SP85-201ENST00000365378 119 ntBASIC6.4□□□□□ -1.38
CDH3P22223 U3.52-201ENST00000384034 216 ntBASIC6.4□□□□□ -1.38
CDH3P22223 RNA5SP251-201ENST00000410614 137 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AL929472.1-201ENST00000417484 429 ntBASIC6.4□□□□□ -1.38
CDH3P22223 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 GAPDHP33-201ENST00000443168 1013 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 RPS7P10-201ENST00000464254 603 ntBASIC6.4□□□□□ -1.38
CDH3P22223 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 OR52H2P-201ENST00000514607 902 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.4□□□□□ -1.38
CDH3P22223 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 MIR4433B-201ENST00000581329 102 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH3P22223 SNORD96A-201ENST00000606577 79 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC093635.1-201ENST00000609028 555 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC068726.1-201ENST00000610993 341 ntBASIC6.4□□□□□ -1.38
CDH3P22223 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 AC120057.5-201ENST00000623840 154 ntBASIC6.4□□□□□ -1.38
CDH3P22223 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH3P22223 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH3P22223 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
CDH3P22223 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH3P22223 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH3P22223 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH3P22223 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CDH3P22223 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH3P22223 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH3P22223 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH3P22223 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CDH3P22223 MIR541-201ENST00000401360 84 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AL049697.3-201ENST00000406493 982 ntBASIC6.39□□□□□ -1.39
CDH3P22223 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH3P22223 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 GPN3P1-201ENST00000423883 535 ntBASIC6.39□□□□□ -1.39
CDH3P22223 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH3P22223 CLNS1AP1-201ENST00000435954 682 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AC128677.1-201ENST00000436016 442 ntBASIC6.39□□□□□ -1.39
CDH3P22223 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 RBMY2AP-201ENST00000445405 1157 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AC234771.2-201ENST00000445718 597 ntBASIC6.39□□□□□ -1.39
CDH3P22223 RBMY2CP-201ENST00000448575 1157 ntBASIC6.39□□□□□ -1.39
CDH3P22223 RBMY2DP-202ENST00000448881 1157 ntBASIC6.39□□□□□ -1.39
CDH3P22223 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH3P22223 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 OR7E158P-201ENST00000524483 910 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH3P22223 AC092375.1-201ENST00000550410 637 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH3P22223 FXNP1-201ENST00000555153 337 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH3P22223 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH3P22223 AL049840.5-201ENST00000602827 552 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AL583832.1-201ENST00000603227 784 ntBASIC6.39□□□□□ -1.39
CDH3P22223 AP000577.1-201ENST00000624366 878 ntBASIC6.39□□□□□ -1.39
CDH3P22223 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 PSMC1P6-201ENST00000477233 1319 ntBASIC6.39□□□□□ -1.39
CDH3P22223 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH3P22223 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH3P22223 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 625.4 ms