Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 AC009220.2-201ENST00000489759 1751 ntBASIC8.01□□□□□ -1.13
HOXD8P13378 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.01□□□□□ -1.13
HOXD8P13378 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 AL162171.3-201ENST00000617439 3178 ntBASIC8.01□□□□□ -1.13
HOXD8P13378 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 AC013268.3-201ENST00000262716 2324 ntBASIC8.01□□□□□ -1.13
HOXD8P13378 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD8P13378 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
HOXD8P13378 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD8P13378 OR7E25P-202ENST00000641088 5937 ntBASIC8.01□□□□□ -1.13
HOXD8P13378 OR52K3P-202ENST00000641797 1729 ntBASIC8□□□□□ -1.13
HOXD8P13378 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 FO082842.1-201ENST00000423552 1370 ntBASIC8□□□□□ -1.13
HOXD8P13378 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8□□□□□ -1.13
HOXD8P13378 RNU6-796P-201ENST00000391086 107 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL034417.1-201ENST00000399343 800 ntBASIC8□□□□□ -1.13
HOXD8P13378 HSPD1P16-201ENST00000402302 394 ntBASIC8□□□□□ -1.13
HOXD8P13378 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 RN7SKP91-201ENST00000410852 288 ntBASIC8□□□□□ -1.13
HOXD8P13378 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 GAPDHP51-201ENST00000426454 1000 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 DPPA2P1-201ENST00000428060 556 ntBASIC8□□□□□ -1.13
HOXD8P13378 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 AC092393.1-201ENST00000439625 742 ntBASIC8□□□□□ -1.13
HOXD8P13378 PPIAP32-201ENST00000449940 472 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 AL591122.1-201ENST00000487348 492 ntBASIC8□□□□□ -1.13
HOXD8P13378 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 AC008967.1-201ENST00000504843 163 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8□□□□□ -1.13
HOXD8P13378 LTV1P1-201ENST00000510683 1237 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 RNA5SP287-201ENST00000516358 103 ntBASIC8□□□□□ -1.13
HOXD8P13378 NPM1P52-201ENST00000518264 846 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8□□□□□ -1.13
HOXD8P13378 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 EIF4A3P1-201ENST00000578499 647 ntBASIC8□□□□□ -1.13
HOXD8P13378 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 MIR4428-201ENST00000584884 73 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC015801.1-201ENST00000585651 153 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC073648.5-201ENST00000603502 305 ntBASIC8□□□□□ -1.13
HOXD8P13378 AP000811.1-201ENST00000603803 651 ntBASIC8□□□□□ -1.13
HOXD8P13378 MTND3P19-201ENST00000603825 345 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL031601.1-201ENST00000605702 394 ntBASIC8□□□□□ -1.13
HOXD8P13378 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 AC024060.1-201ENST00000607052 494 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC8□□□□□ -1.13
HOXD8P13378 OR51C1P-201ENST00000608504 942 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL121809.2-201ENST00000613169 341 ntBASIC8□□□□□ -1.13
HOXD8P13378 RN7SL126P-201ENST00000616400 299 ntBASIC8□□□□□ -1.13
HOXD8P13378 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8□□□□□ -1.13
HOXD8P13378 AC073968.1-201ENST00000618594 637 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL590240.3-201ENST00000621416 943 ntBASIC8□□□□□ -1.13
HOXD8P13378 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 AL008636.1-201ENST00000625038 1018 ntBASIC8□□□□□ -1.13
HOXD8P13378 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC8□□□□□ -1.13
HOXD8P13378 OR8G3P-202ENST00000641572 1255 ntBASIC8□□□□□ -1.13
HOXD8P13378 AL139254.2-202ENST00000641937 1156 ntBASIC8□□□□□ -1.13
HOXD8P13378 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8□□□□□ -1.13
HOXD8P13378 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8□□□□□ -1.13
HOXD8P13378 AC005832.2-201ENST00000538921 1430 ntBASIC8□□□□□ -1.13
HOXD8P13378 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8□□□□□ -1.13
HOXD8P13378 AC087501.5-201ENST00000607496 2374 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms