Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
P04436 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P04436 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
P04436 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
P04436 AP002370.1-201ENST00000528055 1602 ntBASIC5.85□□□□□ -1.47
P04436 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P04436 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.85□□□□□ -1.47
P04436 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
P04436 AC006213.6-201ENST00000623722 4179 ntBASIC5.85□□□□□ -1.47
P04436 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.84□□□□□ -1.47
P04436 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
P04436 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
P04436 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.84□□□□□ -1.47
P04436 CAP1P2-201ENST00000417455 1409 ntBASIC5.84□□□□□ -1.47
P04436 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
P04436 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.84□□□□□ -1.47
P04436 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 AC013488.1-201ENST00000526618 1838 ntBASIC5.84□□□□□ -1.47
P04436 AC011455.2-201ENST00000599320 3336 ntBASIC5.84□□□□□ -1.47
P04436 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
P04436 RNA5SP279-201ENST00000365513 117 ntBASIC5.84□□□□□ -1.47
P04436 AL139805.1-201ENST00000407837 289 ntBASIC5.84□□□□□ -1.47
P04436 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.84□□□□□ -1.47
P04436 DHFRP2-201ENST00000414224 547 ntBASIC5.84□□□□□ -1.47
P04436 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
P04436 AKR1B10P1-201ENST00000425765 942 ntBASIC5.84□□□□□ -1.47
P04436 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AC108479.1-201ENST00000431142 427 ntBASIC5.84□□□□□ -1.47
P04436 IGLV3-4-201ENST00000432300 244 ntBASIC5.84□□□□□ -1.47
P04436 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.84□□□□□ -1.47
P04436 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.84□□□□□ -1.47
P04436 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.84□□□□□ -1.47
P04436 CCNJP2-201ENST00000457810 1163 ntBASIC5.84□□□□□ -1.47
P04436 CTSLP6-201ENST00000458273 1002 ntBASIC5.84□□□□□ -1.47
P04436 AC104339.1-201ENST00000465478 348 ntBASIC5.84□□□□□ -1.47
P04436 AP002453.1-201ENST00000492327 668 ntBASIC5.84□□□□□ -1.47
P04436 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 SNX18P25-201ENST00000510539 758 ntBASIC5.84□□□□□ -1.47
P04436 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.84□□□□□ -1.47
P04436 AC011853.1-201ENST00000518911 454 ntBASIC5.84□□□□□ -1.47
P04436 COX6B1P4-201ENST00000519826 484 ntBASIC5.84□□□□□ -1.47
P04436 IGHV4-55-201ENST00000520889 368 ntBASIC5.84□□□□□ -1.47
P04436 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.84□□□□□ -1.47
P04436 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.84□□□□□ -1.47
P04436 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.84□□□□□ -1.47
P04436 AC244034.2-201ENST00000562504 509 ntBASIC5.84□□□□□ -1.47
P04436 OR7A11P-201ENST00000597719 953 ntBASIC5.84□□□□□ -1.47
P04436 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.84□□□□□ -1.47
P04436 AC097641.3-201ENST00000613523 464 ntBASIC5.84□□□□□ -1.47
P04436 AC073593.1-201ENST00000624500 411 ntBASIC5.84□□□□□ -1.47
P04436 AC111152.1-202ENST00000635848 339 ntBASIC5.84□□□□□ -1.47
P04436 OR7E91P-202ENST00000642062 1198 ntBASIC5.84□□□□□ -1.47
P04436 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P04436 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
P04436 RAD17P2-201ENST00000451754 1977 ntBASIC5.84□□□□□ -1.48
P04436 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
P04436 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
P04436 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.84□□□□□ -1.48
P04436 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.84□□□□□ -1.48
P04436 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 AKAP17BP-201ENST00000431706 2719 ntBASIC5.83□□□□□ -1.48
P04436 AL133243.4-201ENST00000623116 3109 ntBASIC5.83□□□□□ -1.48
P04436 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
P04436 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
P04436 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.83□□□□□ -1.48
P04436 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 YWHAZP6-201ENST00000399764 738 ntBASIC5.83□□□□□ -1.48
P04436 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.83□□□□□ -1.48
P04436 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.83□□□□□ -1.48
P04436 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P04436 GAPDHP59-201ENST00000435908 267 ntBASIC5.83□□□□□ -1.48
P04436 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.83□□□□□ -1.48
P04436 PMS2P9-201ENST00000441237 515 ntBASIC5.83□□□□□ -1.48
P04436 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.83□□□□□ -1.48
P04436 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P04436 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.83□□□□□ -1.48
P04436 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.83□□□□□ -1.48
P04436 RN7SL369P-201ENST00000477138 299 ntBASIC5.83□□□□□ -1.48
P04436 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.83□□□□□ -1.48
P04436 KHDC1P1-201ENST00000511053 508 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms