Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPS23P6-201ENST00000466136 431 ntBASIC7.93□□□□□ -1.14
SCN11AQ9UI33 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 PSMA2P2-201ENST00000504319 686 ntBASIC7.93□□□□□ -1.14
SCN11AQ9UI33 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 FO082842.1-201ENST00000423552 1370 ntBASIC7.93□□□□□ -1.14
SCN11AQ9UI33 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.93□□□□□ -1.14
SCN11AQ9UI33 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SCN11AQ9UI33 AC024587.1-201ENST00000505925 2157 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 RARSP1-201ENST00000542842 1418 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 UBE2V1P14-201ENST00000415815 558 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC073594.1-201ENST00000462065 364 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC024451.1-201ENST00000508013 779 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 RNA5SP400-201ENST00000517155 111 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 KCTD9P4-201ENST00000526766 1166 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AL352984.2-201ENST00000611153 546 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC022726.2-201ENST00000634673 547 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 Z93929.1-201ENST00000418200 1475 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC127024.8-201ENST00000623719 2094 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 BX323845.3-201ENST00000428215 527 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 GAPDHP48-201ENST00000436626 961 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 ACA64.1-201ENST00000459171 127 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC074386.1-201ENST00000476560 767 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 RPL7L1P4-201ENST00000513004 707 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 ZNF322P1-201ENST00000568013 1209 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 COX6CP7-201ENST00000597056 208 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AL445649.1-201ENST00000615941 691 ntBASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.92□□□□□ -1.14
SCN11AQ9UI33 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC015689.2-201ENST00000528172 1738 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RNU105B-201ENST00000364478 208 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RPS27AP3-201ENST00000453803 454 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 RN7SL717P-201ENST00000478343 297 ntBASIC7.91□□□□□ -1.14
SCN11AQ9UI33 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.91□□□□□ -1.14
SCN11AQ9UI33 AC009237.12-201ENST00000604755 742 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms