Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
USB1Q9BQ65 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 Y_RNA.459-201ENST00000384251 102 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 NIP7P3-201ENST00000404319 515 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL592293.2-201ENST00000422292 996 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RIMKLBP2-201ENST00000424737 654 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP001324.1-201ENST00000428553 399 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC005033.1-201ENST00000428904 813 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 GTF2IP20-201ENST00000431663 360 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 BMS1P19-201ENST00000433925 393 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 SUMO2P8-201ENST00000434672 286 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 RPE-210ENST00000438204 796 ntTSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RPE-213ENST00000445268 668 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RPL23AP20-201ENST00000447965 421 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 GAPDHP45-201ENST00000452090 349 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 RPL7P48-201ENST00000461513 746 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RN7SL305P-201ENST00000464862 281 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC092965.1-201ENST00000469748 490 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC099521.1-201ENST00000482557 334 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 RN7SL700P-201ENST00000496982 294 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 KCTD9P2-201ENST00000512203 1013 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 RPL23AP96-201ENST00000514593 591 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP005902.2-201ENST00000518393 307 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP001189.2-201ENST00000527320 189 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP000916.2-201ENST00000528904 286 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RN7SL670P-201ENST00000577235 294 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL391646.1-201ENST00000603860 190 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL513479.1-201ENST00000611376 585 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 PHBP6-201ENST00000614021 786 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL078596.1-201ENST00000624856 447 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC005086.2-201ENST00000624939 228 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 PISRT1-201ENST00000626175 531 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 MIR3160-2-201ENST00000637870 81 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 AL031118.1-201ENST00000607727 2955 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.96□□□□□ -1.14
USB1Q9BQ65 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USB1Q9BQ65 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC7.96□□□□□ -1.14
USB1Q9BQ65 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 OR2A3P-202ENST00000641249 1776 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms