Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL445647.2-201ENST00000615170 130 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 MRPL57P3-201ENST00000619218 176 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AP005212.3-201ENST00000619964 528 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 TRIM53CP-201ENST00000531490 1354 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC062022.1-201ENST00000451026 1684 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 AL136531.3-201ENST00000624378 3658 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC105114.1-201ENST00000624795 1862 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSX3Q99909 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX3Q99909 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 AC068769.1-201ENST00000474767 2426 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 AC092070.2-203ENST00000598377 3644 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 RN7SKP118-201ENST00000364331 330 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 RN7SKP62-201ENST00000384539 329 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 RNU11-201ENST00000387069 134 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LDHAP5-201ENST00000394996 622 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX3Q99909 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 RPLP1P10-201ENST00000413972 339 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX3Q99909 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX3Q99909 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 UBE2V2P1-201ENST00000434717 398 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX3Q99909 OR51P1P-201ENST00000447547 942 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 AL354714.5-201ENST00000450131 590 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX3Q99909 RNF19BPY-201ENST00000458209 1550 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 RPS4XP17-201ENST00000479057 754 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 AL133372.1-201ENST00000493565 745 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX3Q99909 RPL23AP80-201ENST00000495605 424 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 RNA5SP278-201ENST00000517055 102 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 BCAS2P1-201ENST00000528022 632 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 AC007537.1-201ENST00000539347 327 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX3Q99909 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX3Q99909 AC027796.1-201ENST00000575593 512 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX3Q99909 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 AC010615.3-201ENST00000597319 394 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AL360012.1-201ENST00000602813 131 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 LINC02019-201ENST00000608605 2060 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC004943.1-203ENST00000624370 1074 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC093671.1-201ENST00000624981 2929 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AP002800.1-201ENST00000624982 2225 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX3Q99909 AC011471.4-201ENST00000638271 216 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 AC073869.7-201ENST00000640874 297 ntBASIC5.61□□□□□ -1.51
SSX3Q99909 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SSX3Q99909 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX3Q99909 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 AC005225.5-201ENST00000623547 2225 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC004023.1-201ENST00000561473 1744 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms