Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC068522.1-201ENST00000482895 345 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AP000662.1-201ENST00000530952 487 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC009268.1-201ENST00000561352 1203 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC019257.2-201ENST00000605539 497 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC068726.1-201ENST00000610993 341 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC005393.1-201ENST00000617916 584 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AL109620.1-201ENST00000618738 1197 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC005618.1-201ENST00000606901 3148 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 MKI67P1-201ENST00000604297 1460 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC112243.1-201ENST00000623949 3851 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 MTCO1P25-201ENST00000414449 1799 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 FAM32BP-201ENST00000344033 333 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 SNORA70.3-201ENST00000365075 132 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 RNU1-55P-201ENST00000365510 158 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 MIR551B-201ENST00000384984 96 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 FDPSP5-201ENST00000399474 1057 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 UBTFL2-201ENST00000411859 1191 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 RPL7AP51-201ENST00000422016 760 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 RN7SL104P-201ENST00000498686 293 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 MTND6P8-201ENST00000503471 522 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 SNORD96A-201ENST00000606577 79 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC025171.4-201ENST00000607250 1047 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AC073592.7-201ENST00000623659 507 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 AP000720.1-201ENST00000625091 483 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 HPVC1-201ENST00000629899 1198 ntBASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHMP4CQ96CF2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 THAP12P8-201ENST00000447914 2115 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC078880.4-201ENST00000617627 1749 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 RNU1-5P-201ENST00000362684 144 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 Y_RNA.62-201ENST00000362840 99 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 OR6C72P-201ENST00000451403 892 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AL049829.1-201ENST00000465411 156 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 SNORA58-201ENST00000505219 137 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC138517.1-201ENST00000515724 568 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 RN7SKP196-201ENST00000516267 345 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC091304.4-201ENST00000565703 620 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC012368.3-201ENST00000604190 219 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AC073575.2-201ENST00000614212 627 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 AP003789.1-201ENST00000617737 605 ntBASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHMP4CQ96CF2 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms