Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 BX322650.1-201ENST00000332359 2143 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AL050335.1-201ENST00000396909 869 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AL713922.1-201ENST00000416477 747 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 OR13C1P-201ENST00000457612 963 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AC092865.1-201ENST00000544395 1023 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 AC008115.4-201ENST00000619780 775 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 MAPK10-323ENST00000641493 3207 ntBASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL22A1Q8NFW1 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 RN7SKP77-201ENST00000363261 353 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 RN7SKP273-201ENST00000411392 314 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 CBX1P5-201ENST00000475330 559 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC010343.2-201ENST00000510162 224 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AL049840.6-201ENST00000604583 345 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AL021918.2-201ENST00000613415 194 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AL139407.1-201ENST00000613826 1175 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 MIR6810-201ENST00000622701 70 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AL355377.1-201ENST00000621125 1653 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 AL161756.3-201ENST00000641216 2071 ntBASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL22A1Q8NFW1 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 GAPDHP24-201ENST00000328713 983 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 OR6E1P-201ENST00000414424 923 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 RPL36P18-201ENST00000419316 318 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC126120.1-201ENST00000431082 470 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ELOCP3-201ENST00000439303 348 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC108161.1-201ENST00000461060 402 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC023245.1-201ENST00000468501 517 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AL355032.1-201ENST00000472981 438 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 RN7SL184P-201ENST00000488308 297 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC024558.1-201ENST00000505008 528 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 HIGD1AP14-201ENST00000507617 282 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC110056.1-201ENST00000525759 911 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms