Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
PTCH1Q13635 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.74□□□□□ -1.01
PTCH1Q13635 MAPK10-261ENST00000641050 3109 ntBASIC8.74□□□□□ -1.01
PTCH1Q13635 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC022325.1-201ENST00000502748 2199 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL513325.1-201ENST00000417716 1034 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL139156.3-201ENST00000454802 394 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL121579.2-201ENST00000555466 590 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL359704.2-201ENST00000604335 521 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 RPL12P48-201ENST00000605620 304 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 AC022106.1-201ENST00000612834 766 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 AL136981.1-203ENST00000451452 3844 ntBASIC8.73□□□□□ -1.01
PTCH1Q13635 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.73□□□□□ -1.01
PTCH1Q13635 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
PTCH1Q13635 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.73□□□□□ -1.01
PTCH1Q13635 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AL035660.1-201ENST00000422041 222 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AC064862.4-201ENST00000442180 334 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 TRIM60P16-201ENST00000444048 694 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.72□□□□□ -1.01
PTCH1Q13635 SETP21-201ENST00000514799 892 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.72□□□□□ -1.01
PTCH1Q13635 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 AC096708.4-201ENST00000620563 552 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AC011416.1-201ENST00000514947 1732 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AC138915.4-201ENST00000565549 4147 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
PTCH1Q13635 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.72□□□□□ -1.01
PTCH1Q13635 AC073429.2-201ENST00000569694 1444 ntBASIC8.72□□□□□ -1.01
PTCH1Q13635 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
PTCH1Q13635 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PTCH1Q13635 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTCH1Q13635 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTCH1Q13635 RNA5SP156-201ENST00000410250 110 ntBASIC8.71□□□□□ -1.01
PTCH1Q13635 SEPT14P12-201ENST00000442280 560 ntBASIC8.71□□□□□ -1.01
PTCH1Q13635 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.71□□□□□ -1.01
PTCH1Q13635 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 AC092865.4-201ENST00000477936 615 ntBASIC8.71□□□□□ -1.01
PTCH1Q13635 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.71□□□□□ -1.01
PTCH1Q13635 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.71□□□□□ -1.01
PTCH1Q13635 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.71□□□□□ -1.01
PTCH1Q13635 AP005639.1-201ENST00000526939 192 ntBASIC8.71□□□□□ -1.01
PTCH1Q13635 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PTCH1Q13635 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.71□□□□□ -1.01
PTCH1Q13635 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.71□□□□□ -1.01
PTCH1Q13635 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.71□□□□□ -1.01
PTCH1Q13635 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTCH1Q13635 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.01
PTCH1Q13635 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTCH1Q13635 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms