Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 AL049697.3-201ENST00000406493 982 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 RN7SKP148-201ENST00000410179 275 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 AL139415.1-201ENST00000424862 352 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.53□□□□□ -1.68
CKS1BP61024 RPL5P25-201ENST00000441148 775 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC4.53□□□□□ -1.68
CKS1BP61024 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 RPS26P11-201ENST00000463445 348 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC090589.1-201ENST00000473109 362 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 RPS26P6-201ENST00000475156 348 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC079594.1-201ENST00000489757 331 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 RN7SL187P-201ENST00000495587 303 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.53□□□□□ -1.68
CKS1BP61024 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 DCAF13P2-201ENST00000514188 555 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 RPS20-202ENST00000518875 671 ntTSL 2 BASIC4.53□□□□□ -1.68
CKS1BP61024 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 IGHV1-14-201ENST00000523391 241 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 PDCL3P1-201ENST00000534575 734 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.53□□□□□ -1.68
CKS1BP61024 MIR3689C-201ENST00000581239 72 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC4.53□□□□□ -1.68
CKS1BP61024 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 AL031777.2-201ENST00000611953 196 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AC243830.3-201ENST00000616810 376 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 SNX18P10-201ENST00000625014 519 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 NEAT1-202ENST00000501122 22743 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 DLEU2L-201ENST00000371086 3555 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 AC119674.1-202ENST00000641333 1860 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CKS1BP61024 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.53□□□□□ -1.68
CKS1BP61024 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CKS1BP61024 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CKS1BP61024 AC119674.1-213ENST00000641177 1386 ntBASIC4.53□□□□□ -1.69
CKS1BP61024 AC079949.2-201ENST00000617117 2933 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 RPL24P4-201ENST00000326586 421 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 RNA5SP188-201ENST00000362916 129 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CKS1BP61024 PCNAP3-201ENST00000397222 778 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 OR7E91P-201ENST00000400027 866 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 SLC25A5P7-201ENST00000406156 896 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AL358178.1-201ENST00000407698 397 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 TAS2R2P-201ENST00000421146 910 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AL590399.2-201ENST00000427536 309 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC239367.3-201ENST00000428996 814 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 HIST1H2APS6-201ENST00000448609 364 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 RPL7P14-201ENST00000449851 741 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 RN7SL216P-201ENST00000471607 298 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC091982.1-202ENST00000473923 343 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 RPL7AP56-201ENST00000476420 791 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC135999.1-201ENST00000478962 479 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.52□□□□□ -1.69
CKS1BP61024 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 OR5M6P-201ENST00000530227 937 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CKS1BP61024 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms