Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC10.93□□□□□ -0.66
SMARCA4P51532 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SMARCA4P51532 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 APP-206ENST00000359726 3294 ntTSL 2 BASIC10.93□□□□□ -0.66
SMARCA4P51532 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC10.93□□□□□ -0.66
SMARCA4P51532 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC10.93□□□□□ -0.66
SMARCA4P51532 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC10.93□□□□□ -0.66
SMARCA4P51532 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC10.93□□□□□ -0.66
SMARCA4P51532 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMARCA4P51532 AC127024.8-201ENST00000623719 2094 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 RNU105B-201ENST00000364478 208 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 RPL36P18-201ENST00000419316 318 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 NME1P1-201ENST00000420914 382 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 AC009237.1-201ENST00000442127 744 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
SMARCA4P51532 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC10.92□□□□□ -0.66
SMARCA4P51532 AL390726.5-202ENST00000564800 256 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 AC118658.2-201ENST00000618697 459 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 AL691477.1-201ENST00000624398 162 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 ATM-229ENST00000639953 587 ntTSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SMARCA4P51532 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 AC117409.1-201ENST00000470499 1310 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SMARCA4P51532 C4BPAP1-201ENST00000415474 1893 ntBASIC10.92□□□□□ -0.66
SMARCA4P51532 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SMARCA4P51532 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SMARCA4P51532 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SMARCA4P51532 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 RNA5SP375-201ENST00000362975 119 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 RNU4-34P-201ENST00000410431 124 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC10.91□□□□□ -0.66
SMARCA4P51532 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC10.91□□□□□ -0.66
SMARCA4P51532 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10.91□□□□□ -0.66
SMARCA4P51532 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC10.91□□□□□ -0.66
SMARCA4P51532 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC10.91□□□□□ -0.66
SMARCA4P51532 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC10.91□□□□□ -0.66
SMARCA4P51532 AC110716.2-201ENST00000563865 3945 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC10.91□□□□□ -0.66
SMARCA4P51532 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 RNA5SP183-201ENST00000362452 119 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 CYP4F30P-202ENST00000420048 405 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC10.91□□□□□ -0.66
SMARCA4P51532 MGAT2P1-201ENST00000449718 797 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC10.91□□□□□ -0.66
SMARCA4P51532 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC10.91□□□□□ -0.66
SMARCA4P51532 OR10G5P-201ENST00000532733 358 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 MIR4505-201ENST00000582238 73 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 MIR7155-201ENST00000615925 56 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 HOTTIP_3.1-201ENST00000619957 337 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 HDAC1P2-201ENST00000453661 1398 ntBASIC10.91□□□□□ -0.66
SMARCA4P51532 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SMARCA4P51532 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 CREM-217ENST00000439705 2306 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 RNU11-6P-201ENST00000391127 133 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 RN7SKP216-201ENST00000411050 312 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 AL662874.1-201ENST00000426065 230 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC10.9□□□□□ -0.66
SMARCA4P51532 AL157777.1-201ENST00000468100 304 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 AC095057.1-201ENST00000507583 168 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.9□□□□□ -0.66
SMARCA4P51532 MIR1269B-201ENST00000580405 75 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 AC007204.2-201ENST00000615022 616 ntBASIC10.9□□□□□ -0.66
SMARCA4P51532 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMARCA4P51532 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA4P51532 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA4P51532 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA4P51532 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SMARCA4P51532 AP003972.1-201ENST00000625192 5446 ntBASIC10.89□□□□□ -0.67
SMARCA4P51532 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms