Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 SNX18P10-201ENST00000625014 519 ntBASIC5.45□□□□□ -1.54
CDX1P47902 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 AC092070.2-203ENST00000598377 3644 ntBASIC5.44□□□□□ -1.54
CDX1P47902 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 AC092724.1-201ENST00000624623 3397 ntBASIC5.44□□□□□ -1.54
CDX1P47902 TATDN2P3-201ENST00000452855 3665 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.44□□□□□ -1.54
CDX1P47902 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 AC087516.1-201ENST00000561236 2428 ntBASIC5.44□□□□□ -1.54
CDX1P47902 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 MIR187-201ENST00000385062 109 ntBASIC5.44□□□□□ -1.54
CDX1P47902 NPM1P10-201ENST00000398310 865 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AL136100.1-201ENST00000407696 330 ntBASIC5.44□□□□□ -1.54
CDX1P47902 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 RPL17P17-201ENST00000419491 557 ntBASIC5.44□□□□□ -1.54
CDX1P47902 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 BMS1P11-201ENST00000442351 885 ntBASIC5.44□□□□□ -1.54
CDX1P47902 BMS1P9-201ENST00000457640 885 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AC236972.4-201ENST00000458091 963 ntBASIC5.44□□□□□ -1.54
CDX1P47902 RN7SL160P-201ENST00000468558 284 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 SUMO2P4-201ENST00000504193 276 ntBASIC5.44□□□□□ -1.54
CDX1P47902 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 IGLVV-66-201ENST00000523818 341 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 AC069240.2-201ENST00000550242 609 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AC089984.3-201ENST00000552838 363 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.44□□□□□ -1.54
CDX1P47902 AC067805.1-201ENST00000559344 470 ntBASIC5.44□□□□□ -1.54
CDX1P47902 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 U91328.4-201ENST00000608919 517 ntBASIC5.44□□□□□ -1.54
CDX1P47902 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AC004943.1-203ENST00000624370 1074 ntBASIC5.44□□□□□ -1.54
CDX1P47902 AC011369.2-201ENST00000624423 1567 ntBASIC5.44□□□□□ -1.54
CDX1P47902 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDX1P47902 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 AC024651.2-201ENST00000562480 2098 ntBASIC5.44□□□□□ -1.54
CDX1P47902 MTCO1P25-201ENST00000414449 1799 ntBASIC5.44□□□□□ -1.54
CDX1P47902 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDX1P47902 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDX1P47902 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDX1P47902 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 AC009220.2-201ENST00000489759 1751 ntBASIC5.43□□□□□ -1.54
CDX1P47902 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.43□□□□□ -1.54
CDX1P47902 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.43□□□□□ -1.54
CDX1P47902 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDX1P47902 AL139039.2-201ENST00000407436 479 ntBASIC5.43□□□□□ -1.54
CDX1P47902 RNU6-564P-201ENST00000410983 104 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 AC091492.1-201ENST00000419844 272 ntBASIC5.43□□□□□ -1.54
CDX1P47902 E2F6P1-201ENST00000428850 745 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AL392003.1-201ENST00000434394 243 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AL034399.1-201ENST00000451535 380 ntBASIC5.43□□□□□ -1.54
CDX1P47902 RPL31P53-201ENST00000457065 348 ntBASIC5.43□□□□□ -1.54
CDX1P47902 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms