Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC241952.1-201ENST00000612480 6897 ntBASIC6.62□□□□□ -1.35
HTTP42858 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 CUBNP2-201ENST00000443534 1139 ntBASIC6.61□□□□□ -1.35
HTTP42858 RPS27AP3-201ENST00000453803 454 ntBASIC6.61□□□□□ -1.35
HTTP42858 AL035090.1-201ENST00000454835 332 ntBASIC6.61□□□□□ -1.35
HTTP42858 NRBF2P4-201ENST00000520874 850 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.61□□□□□ -1.35
HTTP42858 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 GTF2IP4-201ENST00000453092 2054 ntBASIC6.61□□□□□ -1.35
HTTP42858 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 AC011753.3-201ENST00000443436 406 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC092324.1-201ENST00000468671 324 ntBASIC6.61□□□□□ -1.35
HTTP42858 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 AC234771.5-201ENST00000600161 514 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.61□□□□□ -1.35
HTTP42858 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 YES1P1-201ENST00000418510 1628 ntBASIC6.61□□□□□ -1.35
HTTP42858 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.61□□□□□ -1.35
HTTP42858 MIR1204-201ENST00000408388 67 ntBASIC6.61□□□□□ -1.35
HTTP42858 CYP4F30P-202ENST00000420048 405 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.61□□□□□ -1.35
HTTP42858 RPS11P7-201ENST00000442125 465 ntBASIC6.61□□□□□ -1.35
HTTP42858 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 AC104164.1-201ENST00000460282 590 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.61□□□□□ -1.35
HTTP42858 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.61□□□□□ -1.35
HTTP42858 AC063949.1-201ENST00000552900 865 ntBASIC6.61□□□□□ -1.35
HTTP42858 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.61□□□□□ -1.35
HTTP42858 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.61□□□□□ -1.35
HTTP42858 AL513548.2-201ENST00000602994 1207 ntBASIC6.61□□□□□ -1.35
HTTP42858 AL445528.2-201ENST00000620582 470 ntBASIC6.61□□□□□ -1.35
HTTP42858 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HTTP42858 PART1-201ENST00000504876 5616 ntTSL 2 BASIC6.6□□□□□ -1.35
HTTP42858 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 AC131971.1-201ENST00000332881 1482 ntBASIC6.6□□□□□ -1.35
HTTP42858 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 HDAC1P2-201ENST00000453661 1398 ntBASIC6.6□□□□□ -1.35
HTTP42858 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 MIR433-201ENST00000384837 93 ntBASIC6.6□□□□□ -1.35
HTTP42858 RPS4XP5-201ENST00000419038 768 ntBASIC6.6□□□□□ -1.35
HTTP42858 PRUNEP1-201ENST00000425846 705 ntBASIC6.6□□□□□ -1.35
HTTP42858 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.6□□□□□ -1.35
HTTP42858 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.6□□□□□ -1.35
HTTP42858 RPL37AP8-201ENST00000494116 276 ntBASIC6.6□□□□□ -1.35
HTTP42858 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.6□□□□□ -1.35
HTTP42858 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HTTP42858 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.6□□□□□ -1.35
HTTP42858 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.6□□□□□ -1.35
HTTP42858 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HTTP42858 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC6.6□□□□□ -1.35
HTTP42858 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.6□□□□□ -1.35
HTTP42858 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
HTTP42858 UGT2B25P-201ENST00000511504 1586 ntBASIC6.6□□□□□ -1.35
HTTP42858 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HTTP42858 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.6□□□□□ -1.35
HTTP42858 AP000547.1-201ENST00000454360 617 ntBASIC6.6□□□□□ -1.35
HTTP42858 RN7SL738P-201ENST00000470264 297 ntBASIC6.6□□□□□ -1.35
HTTP42858 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.6□□□□□ -1.35
HTTP42858 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms