Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 MAPK10-323ENST00000641493 3207 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL5A3P25940 RN7SKP124-201ENST00000364730 341 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A3P25940 SBDSP1-204ENST00000453858 737 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 AC026348.1-201ENST00000462549 1053 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.7□□□□□ -1.18
COL5A3P25940 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A3P25940 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A3P25940 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.7□□□□□ -1.18
COL5A3P25940 AP006245.2-201ENST00000522004 300 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 PCNAP4-201ENST00000532690 730 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL5A3P25940 AC022404.1-201ENST00000555320 273 ntBASIC7.7□□□□□ -1.18
COL5A3P25940 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A3P25940 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A3P25940 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
COL5A3P25940 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A3P25940 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A3P25940 AC016739.1-201ENST00000405359 345 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 UBE2V1P14-201ENST00000415815 558 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC007394.1-201ENST00000421941 531 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC104164.1-201ENST00000460282 590 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 SIAH1P1-201ENST00000479411 923 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 AC093270.2-201ENST00000486157 792 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 AC114728.1-201ENST00000488289 483 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC091078.2-201ENST00000557145 559 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A3P25940 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A3P25940 WDR95P-201ENST00000425638 1542 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 Z83820.1-201ENST00000456978 1499 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A3P25940 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 RBPJP7-201ENST00000442803 1447 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 RBPJP5-201ENST00000449433 1447 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC092111.1-201ENST00000618256 3358 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
COL5A3P25940 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A3P25940 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL5A3P25940 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 RNA5SP400-201ENST00000517155 111 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A3P25940 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.69□□□□□ -1.18
COL5A3P25940 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 SDR42E1P1-201ENST00000611327 477 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 AC004808.2-201ENST00000627965 773 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A3P25940 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL5A3P25940 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A3P25940 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL5A3P25940 AP001541.1-201ENST00000623322 1904 ntBASIC7.69□□□□□ -1.18
COL5A3P25940 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A3P25940 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A3P25940 AL023806.3-201ENST00000638502 2704 ntBASIC7.68□□□□□ -1.18
COL5A3P25940 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A3P25940 PABPC1P6-201ENST00000445594 1829 ntBASIC7.68□□□□□ -1.18
COL5A3P25940 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A3P25940 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A3P25940 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A3P25940 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A3P25940 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A3P25940 AL590763.1-201ENST00000398297 1545 ntBASIC7.68□□□□□ -1.18
COL5A3P25940 AF131215.2-201ENST00000531549 1710 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms