Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RETP07949 LYARP1-201ENST00000436977 1501 ntBASIC6.64□□□□□ -1.35
RETP07949 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RETP07949 AC062029.1-202ENST00000606164 3651 ntBASIC6.64□□□□□ -1.35
RETP07949 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.64□□□□□ -1.35
RETP07949 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RETP07949 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RETP07949 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.64□□□□□ -1.35
RETP07949 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RETP07949 AKAP17BP-201ENST00000431706 2719 ntBASIC6.63□□□□□ -1.35
RETP07949 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RETP07949 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RETP07949 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.63□□□□□ -1.35
RETP07949 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 AL139805.1-201ENST00000407837 289 ntBASIC6.63□□□□□ -1.35
RETP07949 CYCSP17-201ENST00000407870 315 ntBASIC6.63□□□□□ -1.35
RETP07949 SLC20A1P1-201ENST00000413906 956 ntBASIC6.63□□□□□ -1.35
RETP07949 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.63□□□□□ -1.35
RETP07949 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.63□□□□□ -1.35
RETP07949 PNKDP1-201ENST00000435914 430 ntBASIC6.63□□□□□ -1.35
RETP07949 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 AC073109.1-201ENST00000445066 978 ntBASIC6.63□□□□□ -1.35
RETP07949 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 PPIAP19-201ENST00000486414 492 ntBASIC6.63□□□□□ -1.35
RETP07949 AP002453.1-201ENST00000492327 668 ntBASIC6.63□□□□□ -1.35
RETP07949 AC063943.2-201ENST00000495697 534 ntBASIC6.63□□□□□ -1.35
RETP07949 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.63□□□□□ -1.35
RETP07949 EEF1B2P2-201ENST00000519625 676 ntBASIC6.63□□□□□ -1.35
RETP07949 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.63□□□□□ -1.35
RETP07949 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 AC133552.4-201ENST00000576103 676 ntBASIC6.63□□□□□ -1.35
RETP07949 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 AC245052.7-201ENST00000601161 359 ntBASIC6.63□□□□□ -1.35
RETP07949 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.63□□□□□ -1.35
RETP07949 AL035410.2-201ENST00000604963 864 ntBASIC6.63□□□□□ -1.35
RETP07949 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.63□□□□□ -1.35
RETP07949 SNORD96A-201ENST00000606577 79 ntBASIC6.63□□□□□ -1.35
RETP07949 AC026951.2-201ENST00000613847 241 ntBASIC6.63□□□□□ -1.35
RETP07949 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.63□□□□□ -1.35
RETP07949 AL451064.2-201ENST00000623514 1654 ntBASIC6.63□□□□□ -1.35
RETP07949 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.63□□□□□ -1.35
RETP07949 AC112243.1-201ENST00000623949 3851 ntBASIC6.63□□□□□ -1.35
RETP07949 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RETP07949 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.63□□□□□ -1.35
RETP07949 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.62□□□□□ -1.35
RETP07949 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.62□□□□□ -1.35
RETP07949 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.62□□□□□ -1.35
RETP07949 PSMC1P6-201ENST00000477233 1319 ntBASIC6.62□□□□□ -1.35
RETP07949 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.62□□□□□ -1.35
RETP07949 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.62□□□□□ -1.35
RETP07949 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RETP07949 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RETP07949 RN7SKP47-201ENST00000365347 328 ntBASIC6.62□□□□□ -1.35
RETP07949 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.62□□□□□ -1.35
RETP07949 AC003045.1-201ENST00000398779 713 ntBASIC6.62□□□□□ -1.35
RETP07949 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.62□□□□□ -1.35
RETP07949 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RETP07949 RN7SKP144-201ENST00000411108 279 ntBASIC6.62□□□□□ -1.35
RETP07949 CDY17P-201ENST00000414121 1282 ntBASIC6.62□□□□□ -1.35
RETP07949 AC079355.1-201ENST00000421770 223 ntBASIC6.62□□□□□ -1.35
RETP07949 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.62□□□□□ -1.35
RETP07949 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 AP004607.6-201ENST00000525033 1202 ntBASIC6.62□□□□□ -1.35
RETP07949 AC027369.2-201ENST00000528030 440 ntBASIC6.62□□□□□ -1.35
RETP07949 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.62□□□□□ -1.35
RETP07949 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.62□□□□□ -1.35
RETP07949 CYCSP38-201ENST00000559840 322 ntBASIC6.62□□□□□ -1.35
RETP07949 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.62□□□□□ -1.35
RETP07949 AL157762.1-201ENST00000619612 415 ntBASIC6.62□□□□□ -1.35
RETP07949 SNORA16A-202ENST00000628458 135 ntBASIC6.62□□□□□ -1.35
RETP07949 AC073488.6-201ENST00000632293 754 ntBASIC6.62□□□□□ -1.35
RETP07949 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.62□□□□□ -1.35
RETP07949 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.62□□□□□ -1.35
RETP07949 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RETP07949 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.61□□□□□ -1.35
RETP07949 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RETP07949 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms