Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.92□□□□□ -1.3
RB1P06400 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
RB1P06400 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RB1P06400 DUTP4-201ENST00000424782 475 ntBASIC6.92□□□□□ -1.3
RB1P06400 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.92□□□□□ -1.3
RB1P06400 AC115223.1-201ENST00000466377 870 ntBASIC6.92□□□□□ -1.3
RB1P06400 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.92□□□□□ -1.3
RB1P06400 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.92□□□□□ -1.3
RB1P06400 RNA5SP206-201ENST00000516703 121 ntBASIC6.92□□□□□ -1.3
RB1P06400 AC060775.1-201ENST00000518241 520 ntBASIC6.92□□□□□ -1.3
RB1P06400 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.92□□□□□ -1.3
RB1P06400 MRPS21P8-201ENST00000569196 235 ntBASIC6.92□□□□□ -1.3
RB1P06400 AC004232.1-201ENST00000571388 208 ntBASIC6.92□□□□□ -1.3
RB1P06400 SNORA70D-201ENST00000578836 135 ntBASIC6.92□□□□□ -1.3
RB1P06400 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 AC100767.2-201ENST00000604840 693 ntBASIC6.92□□□□□ -1.3
RB1P06400 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.92□□□□□ -1.3
RB1P06400 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.92□□□□□ -1.3
RB1P06400 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.92□□□□□ -1.3
RB1P06400 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AC104162.1-201ENST00000430831 2382 ntBASIC6.91□□□□□ -1.3
RB1P06400 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AC093829.1-201ENST00000506662 1618 ntBASIC6.91□□□□□ -1.3
RB1P06400 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 AL021877.2-201ENST00000624442 10684 ntBASIC6.91□□□□□ -1.3
RB1P06400 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 AC138915.4-201ENST00000565549 4147 ntBASIC6.91□□□□□ -1.3
RB1P06400 TATDN2P3-201ENST00000452855 3665 ntBASIC6.91□□□□□ -1.3
RB1P06400 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AL035696.2-201ENST00000407941 709 ntBASIC6.91□□□□□ -1.3
RB1P06400 Z68694.1-201ENST00000413929 841 ntBASIC6.91□□□□□ -1.3
RB1P06400 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.91□□□□□ -1.3
RB1P06400 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 AL590004.3-202ENST00000445883 451 ntBASIC6.91□□□□□ -1.3
RB1P06400 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 RN7SL174P-201ENST00000475578 289 ntBASIC6.91□□□□□ -1.3
RB1P06400 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 IGHV4-55-201ENST00000520889 368 ntBASIC6.91□□□□□ -1.3
RB1P06400 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 AC092681.3-201ENST00000609463 678 ntBASIC6.91□□□□□ -1.3
RB1P06400 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.91□□□□□ -1.3
RB1P06400 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
RB1P06400 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RB1P06400 AC125238.2-201ENST00000430003 1440 ntBASIC6.91□□□□□ -1.3
RB1P06400 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RB1P06400 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms