Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RN7SL475P-201ENST00000583379 298 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC090616.1-201ENST00000583895 447 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC015818.6-201ENST00000584274 634 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 RN7SL261P-201ENST00000613441 282 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 AL353684.1-201ENST00000622677 1120 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
HLA-DOAP06340 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
HLA-DOAP06340 XKRY2-202ENST00000623874 1581 ntBASIC7.59□□□□□ -1.2
HLA-DOAP06340 XKRY-202ENST00000624960 1581 ntBASIC7.59□□□□□ -1.2
HLA-DOAP06340 AC083899.2-201ENST00000423285 1376 ntBASIC7.59□□□□□ -1.2
HLA-DOAP06340 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL136984.1-201ENST00000607611 1893 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 OR2M1P-201ENST00000318104 951 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL023284.3-201ENST00000407767 334 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL139415.1-201ENST00000424862 352 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC115283.1-201ENST00000427353 400 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 SOCS5P1-201ENST00000440415 949 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 TAAR4P-201ENST00000454843 1039 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 RPL12P30-201ENST00000488389 499 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AL445647.2-201ENST00000615170 130 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.58□□□□□ -1.2
HLA-DOAP06340 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-DOAP06340 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-DOAP06340 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-DOAP06340 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-DOAP06340 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 RPS2P45-201ENST00000469997 2057 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 AMYP1-201ENST00000440059 1023 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 GAPDHP16-201ENST00000448152 962 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 BZW1P1-201ENST00000454901 1240 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 OR4D12P-201ENST00000509361 911 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC095052.1-201ENST00000509955 863 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 COX6B1P4-201ENST00000519826 484 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-DOAP06340 OR7E158P-201ENST00000524483 910 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 GLYATL1P2-202ENST00000588046 902 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 BNIP3P41-202ENST00000616656 861 ntBASIC7.57□□□□□ -1.2
HLA-DOAP06340 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-DOAP06340 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-DOAP06340 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms