Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.75□□□□□ -1.33
APOEP02649 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 STAG3L4-201ENST00000352103 530 ntBASIC6.75□□□□□ -1.33
APOEP02649 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.75□□□□□ -1.33
APOEP02649 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.75□□□□□ -1.33
APOEP02649 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 AL360013.1-201ENST00000419031 858 ntBASIC6.75□□□□□ -1.33
APOEP02649 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.75□□□□□ -1.33
APOEP02649 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 AC096632.2-201ENST00000438139 1239 ntBASIC6.75□□□□□ -1.33
APOEP02649 RPL23AP64-201ENST00000469465 435 ntBASIC6.75□□□□□ -1.33
APOEP02649 AC092824.1-201ENST00000483524 576 ntBASIC6.75□□□□□ -1.33
APOEP02649 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 RPL9P15-201ENST00000491096 532 ntBASIC6.75□□□□□ -1.33
APOEP02649 AC022206.1-201ENST00000495947 347 ntBASIC6.75□□□□□ -1.33
APOEP02649 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.75□□□□□ -1.33
APOEP02649 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 AC023968.1-201ENST00000560719 475 ntBASIC6.75□□□□□ -1.33
APOEP02649 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 AC011497.2-201ENST00000600255 639 ntBASIC6.75□□□□□ -1.33
APOEP02649 AC091193.1-201ENST00000604640 448 ntBASIC6.75□□□□□ -1.33
APOEP02649 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.75□□□□□ -1.33
APOEP02649 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.75□□□□□ -1.33
APOEP02649 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
APOEP02649 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 AC005332.9-201ENST00000620266 2921 ntBASIC6.74□□□□□ -1.33
APOEP02649 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 FAM32BP-201ENST00000344033 333 ntBASIC6.74□□□□□ -1.33
APOEP02649 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 AL391419.1-201ENST00000398901 1275 ntBASIC6.74□□□□□ -1.33
APOEP02649 AL023284.3-201ENST00000407767 334 ntBASIC6.74□□□□□ -1.33
APOEP02649 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.74□□□□□ -1.33
APOEP02649 AC083862.1-201ENST00000427378 1242 ntBASIC6.74□□□□□ -1.33
APOEP02649 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.74□□□□□ -1.33
APOEP02649 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.74□□□□□ -1.33
APOEP02649 AC128716.1-201ENST00000475129 166 ntBASIC6.74□□□□□ -1.33
APOEP02649 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.74□□□□□ -1.33
APOEP02649 EIF4E2P2-201ENST00000492033 736 ntBASIC6.74□□□□□ -1.33
APOEP02649 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 AC138207.8-204ENST00000579588 527 ntBASIC6.74□□□□□ -1.33
APOEP02649 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
APOEP02649 AP001885.1-201ENST00000621658 558 ntBASIC6.74□□□□□ -1.33
APOEP02649 MIR6823-201ENST00000622118 61 ntBASIC6.74□□□□□ -1.33
APOEP02649 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 AL121936.2-201ENST00000641935 662 ntBASIC6.74□□□□□ -1.33
APOEP02649 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.74□□□□□ -1.33
APOEP02649 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
APOEP02649 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
APOEP02649 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.73□□□□□ -1.33
APOEP02649 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.73□□□□□ -1.33
APOEP02649 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
APOEP02649 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 AC121334.1-201ENST00000396414 802 ntBASIC6.73□□□□□ -1.33
APOEP02649 PRELID1P1-201ENST00000403549 660 ntBASIC6.73□□□□□ -1.33
APOEP02649 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms