Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC079355.1-201ENST00000421770 223 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.56□□□□□ -1.2
COL1A1P02452 AL353662.1-201ENST00000439099 327 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 AL512593.1-201ENST00000444758 779 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 AC026254.2-201ENST00000475295 371 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 RN7SL273P-201ENST00000481561 299 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 Y_RNA.710-201ENST00000516975 110 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.56□□□□□ -1.2
COL1A1P02452 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.56□□□□□ -1.2
COL1A1P02452 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 MIR5095-201ENST00000578844 88 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.56□□□□□ -1.2
COL1A1P02452 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 AC020763.5-201ENST00000623298 430 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.56□□□□□ -1.2
COL1A1P02452 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.56□□□□□ -1.2
COL1A1P02452 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.56□□□□□ -1.2
COL1A1P02452 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
COL1A1P02452 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
COL1A1P02452 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.56□□□□□ -1.2
COL1A1P02452 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
COL1A1P02452 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 AP002364.1-201ENST00000623330 3386 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 MIR323A-201ENST00000362199 86 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 SNORA21-201ENST00000362423 132 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 SNORA43.1-201ENST00000364863 140 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC087752.1-201ENST00000391360 558 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 LYPLA1P1-201ENST00000434514 622 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 ATP5LP2-201ENST00000440646 311 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 RANP2-201ENST00000456833 229 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC021269.1-201ENST00000526860 705 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL1A1P02452 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC104581.5-201ENST00000624171 7141 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 PSG10P-201ENST00000501199 1500 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL1A1P02452 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL1A1P02452 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 RN7SKP292-201ENST00000365522 317 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL1A1P02452 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC097721.1-201ENST00000427150 1253 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC009237.1-201ENST00000442127 744 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC092865.1-201ENST00000544395 1023 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC073916.1-201ENST00000545095 130 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 RPA2P1-201ENST00000556557 721 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC020978.7-201ENST00000575953 1187 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC090236.2-201ENST00000587933 1101 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 AC097467.4-201ENST00000605504 141 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.55□□□□□ -1.2
COL1A1P02452 OR7A1P-202ENST00000641542 1158 ntBASIC7.55□□□□□ -1.2
COL1A1P02452 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms