Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.78□□□□□ -1
ALDH1A1P00352 FUNDC2P3-201ENST00000334716 533 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AL512430.2-201ENST00000406786 339 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 PTGES3P1-201ENST00000439531 483 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 RPL23AP23-201ENST00000452590 471 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 PSMA6P2-201ENST00000457574 686 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 RPL23AP44-201ENST00000482216 473 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC079594.1-201ENST00000489757 331 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.78□□□□□ -1
ALDH1A1P00352 NOP56P3-201ENST00000549457 385 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.78□□□□□ -1
ALDH1A1P00352 AL390208.1-201ENST00000605885 644 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC015819.1-201ENST00000613588 663 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC015871.5-202ENST00000623252 701 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 AC090617.9-201ENST00000623751 147 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.78□□□□□ -1
ALDH1A1P00352 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 MIR665-201ENST00000635949 72 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 AC009220.2-201ENST00000489759 1751 ntBASIC8.78□□□□□ -1
ALDH1A1P00352 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.78□□□□□ -1
ALDH1A1P00352 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
ALDH1A1P00352 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.78□□□□□ -1
ALDH1A1P00352 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.77□□□□□ -1
ALDH1A1P00352 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
ALDH1A1P00352 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
ALDH1A1P00352 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1
ALDH1A1P00352 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AL590065.1-201ENST00000603371 4774 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC120114.2-201ENST00000567795 2272 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 FAM3C2-201ENST00000312214 681 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 Y_RNA.578-201ENST00000390903 88 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 ERHP2-201ENST00000402323 299 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AL139098.1-201ENST00000407291 389 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 RN7SKP146-201ENST00000410242 334 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 RNU6-920P-201ENST00000410926 92 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 EEF1A1P40-201ENST00000412883 573 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ALDH1A1P00352 UBTFL3-201ENST00000418934 1024 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 ANKRD30BP3-201ENST00000444850 1070 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 COX6CP2-201ENST00000444980 225 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 AL451074.4-201ENST00000447545 470 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 RPS16P9-201ENST00000477220 427 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC008628.2-201ENST00000502605 298 ntBASIC8.77□□□□□ -1.01
ALDH1A1P00352 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
ALDH1A1P00352 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms