Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 AC125238.2-201ENST00000430003 1440 ntBASIC10.79□□□□□ -0.68
CUX2O14529 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CUX2O14529 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CUX2O14529 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC10.79□□□□□ -0.68
CUX2O14529 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC10.79□□□□□ -0.68
CUX2O14529 RPS7P14-201ENST00000426405 583 ntBASIC10.79□□□□□ -0.68
CUX2O14529 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC10.79□□□□□ -0.68
CUX2O14529 AC007686.1-201ENST00000488511 463 ntBASIC10.79□□□□□ -0.68
CUX2O14529 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC10.79□□□□□ -0.68
CUX2O14529 AC122713.1-201ENST00000518368 1015 ntBASIC10.79□□□□□ -0.68
CUX2O14529 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 AL512329.2-201ENST00000607350 548 ntBASIC10.79□□□□□ -0.68
CUX2O14529 NAA60-237ENST00000615865 326 ntTSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.79□□□□□ -0.68
CUX2O14529 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
CUX2O14529 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CUX2O14529 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC10.78□□□□□ -0.68
CUX2O14529 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC10.78□□□□□ -0.68
CUX2O14529 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 AL356317.1-201ENST00000396110 1436 ntBASIC10.78□□□□□ -0.68
CUX2O14529 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
CUX2O14529 RNA5SP375-201ENST00000362975 119 ntBASIC10.78□□□□□ -0.68
CUX2O14529 AL645733.1-201ENST00000402250 217 ntBASIC10.78□□□□□ -0.68
CUX2O14529 Z80107.2-201ENST00000445127 392 ntBASIC10.78□□□□□ -0.68
CUX2O14529 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC10.78□□□□□ -0.68
CUX2O14529 MIR4330-201ENST00000579077 105 ntBASIC10.78□□□□□ -0.68
CUX2O14529 OR7A11P-201ENST00000597719 953 ntBASIC10.78□□□□□ -0.68
CUX2O14529 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10.78□□□□□ -0.68
CUX2O14529 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC10.78□□□□□ -0.68
CUX2O14529 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC10.78□□□□□ -0.68
CUX2O14529 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CUX2O14529 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CUX2O14529 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CUX2O14529 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
CUX2O14529 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CUX2O14529 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CUX2O14529 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CUX2O14529 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CUX2O14529 AC090958.1-201ENST00000511122 351 ntBASIC10.77□□□□□ -0.69
CUX2O14529 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC10.77□□□□□ -0.69
CUX2O14529 MIR4436B2-201ENST00000581415 91 ntBASIC10.77□□□□□ -0.69
CUX2O14529 MIR4436B1-201ENST00000583272 91 ntBASIC10.77□□□□□ -0.69
CUX2O14529 PACRG-210ENST00000611387 279 ntTSL 5 BASIC10.77□□□□□ -0.69
CUX2O14529 AC131009.3-201ENST00000621809 287 ntBASIC10.77□□□□□ -0.69
CUX2O14529 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CUX2O14529 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CUX2O14529 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CUX2O14529 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
CUX2O14529 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CUX2O14529 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CUX2O14529 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CUX2O14529 AL034417.4-202ENST00000642135 2236 ntBASIC10.76□□□□□ -0.69
CUX2O14529 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CUX2O14529 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC10.76□□□□□ -0.69
CUX2O14529 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC10.76□□□□□ -0.69
CUX2O14529 CDK7P1-201ENST00000434574 693 ntBASIC10.76□□□□□ -0.69
CUX2O14529 AC245452.2-201ENST00000435222 392 ntBASIC10.76□□□□□ -0.69
CUX2O14529 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC10.76□□□□□ -0.69
CUX2O14529 AC022415.1-202ENST00000486612 523 ntBASIC10.76□□□□□ -0.69
CUX2O14529 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC10.76□□□□□ -0.69
CUX2O14529 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC10.76□□□□□ -0.69
CUX2O14529 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC10.76□□□□□ -0.69
CUX2O14529 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC10.76□□□□□ -0.69
CUX2O14529 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CUX2O14529 AC100827.5-201ENST00000615883 426 ntBASIC10.76□□□□□ -0.69
CUX2O14529 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms