Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC021242.1-201ENST00000507315 2035 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC022150.4-201ENST00000598322 2848 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 OR56A4-201ENST00000330728 1209 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 VIM2P-201ENST00000402383 1294 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL589763.1-201ENST00000412257 791 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC003080.1-201ENST00000413552 767 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 RPS7P15-201ENST00000415804 584 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 EIF1P3-201ENST00000423841 334 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC011998.2-201ENST00000430884 473 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 HMGB3P12-201ENST00000438745 556 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 MRPL50P4-201ENST00000446432 475 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC104306.1-201ENST00000449702 371 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL606490.1-201ENST00000452266 765 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL590639.1-201ENST00000456484 337 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 HSPE1P22-201ENST00000456856 327 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 SLC25A15P2-201ENST00000457292 338 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 RPL7P19-201ENST00000469948 618 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC139783.2-201ENST00000504847 1145 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AMD1P3-201ENST00000508874 994 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 NPM1P21-201ENST00000513394 762 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 RN7SKP13-201ENST00000515933 244 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 RN7SKP116-201ENST00000516902 319 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 OR4A11P-201ENST00000529557 906 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 MIR3682-201ENST00000581338 84 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC011840.5-201ENST00000582125 771 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC008737.2-201ENST00000599446 118 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC068802.1-201ENST00000603420 732 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL122127.1-201ENST00000603832 327 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC019322.2-201ENST00000605634 147 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC124303.1-201ENST00000605703 360 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC090425.1-201ENST00000610007 140 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC005858.4-201ENST00000623191 700 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC021106.3-201ENST00000623925 531 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 U6.107-201ENST00000637108 79 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC245100.4-207ENST00000640776 1082 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 Z83820.1-201ENST00000456978 1499 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AL353763.2-201ENST00000623489 1903 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 GDI2P1-201ENST00000429312 1336 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC107982.1-201ENST00000507171 1300 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ST7-213ENST00000432298 1956 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC105233.5-202ENST00000642083 4132 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
USB1Q9BQ65 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USB1Q9BQ65 ITPRIPL1-201ENST00000361124 4295 ntBASIC7.96□□□□□ -1.13
USB1Q9BQ65 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
USB1Q9BQ65 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms