Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL139148.1-201ENST00000427122 680 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 EIF3LP3-201ENST00000495197 822 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL049779.2-201ENST00000553847 315 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC022404.1-201ENST00000555320 273 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AL691477.1-201ENST00000624398 162 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CASC19-264ENST00000641912 1184 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 AC092725.2-201ENST00000567658 1389 ntBASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ALMS1Q8TCU4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC092821.3-202ENST00000641304 2767 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 METTL15P3-201ENST00000415522 1221 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 RPS7P8-201ENST00000418311 581 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 EIF2S2P3-201ENST00000428356 999 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SUMO2P3-201ENST00000438311 288 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 GSTA7P-201ENST00000438425 448 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 PCNAP4-201ENST00000532690 730 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 GTF2IP6-201ENST00000583143 541 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 MIR6820-201ENST00000611508 62 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC005393.1-201ENST00000617916 584 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC125238.2-201ENST00000430003 1440 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CASC19-228ENST00000641414 1684 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC092017.2-201ENST00000427600 362 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 RN7SL547P-201ENST00000490793 290 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 MIR4330-201ENST00000579077 105 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC022919.1-201ENST00000624979 626 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SAMMSON-227ENST00000642114 1199 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL035660.1-201ENST00000422041 222 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CFL1P1-202ENST00000432948 411 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 RN7SL808P-201ENST00000496066 299 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL121579.2-201ENST00000555466 590 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL021918.2-201ENST00000613415 194 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms