Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC011225.1-201ENST00000457751 369 ntBASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 MAPK10-261ENST00000641050 3109 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 NEPNP-201ENST00000404786 1371 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 RNA5SP132-201ENST00000364725 118 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 RNU6-171P-201ENST00000384354 107 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 MIR433-201ENST00000384837 93 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 RNU11-6P-201ENST00000391127 133 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 OR3A2-201ENST00000408891 1076 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 AC074386.1-201ENST00000476560 767 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 AC110597.1-201ENST00000562669 3176 ntBASIC9.29□□□□□ -0.92
CDC42BPAQ5VT25 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC013488.1-201ENST00000526618 1838 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RNA5SP46-201ENST00000362370 120 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 MIR143-201ENST00000385300 106 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL513325.1-201ENST00000417716 1034 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 SEPT14P12-201ENST00000442280 560 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RPS27AP2-201ENST00000457576 465 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL157777.1-201ENST00000468100 304 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC010343.2-201ENST00000510162 224 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC020916.2-201ENST00000591242 360 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC097467.4-201ENST00000605504 141 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL021918.2-201ENST00000613415 194 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC027279.4-201ENST00000624371 2072 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC009166.2-201ENST00000624410 2833 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 SNORA64.1-201ENST00000362600 132 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL096829.1-201ENST00000413677 457 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 SDHDP6-201ENST00000414693 480 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 Z93019.1-201ENST00000416450 973 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AK4P4-201ENST00000419465 646 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RPL34P3-201ENST00000421454 338 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 DEFA9P-201ENST00000433042 285 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 RPS27AP3-201ENST00000453803 454 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 AL161901.1-201ENST00000624954 3425 ntBASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42BPAQ5VT25 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.27□□□□□ -0.92
CDC42BPAQ5VT25 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CDC42BPAQ5VT25 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
CDC42BPAQ5VT25 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC9.27□□□□□ -0.92
CDC42BPAQ5VT25 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 CASC19-205ENST00000641013 1411 ntBASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 UBE2V1P14-201ENST00000415815 558 ntBASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 GTF3AP1-201ENST00000416942 1004 ntBASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 VDAC1P2-201ENST00000423609 850 ntBASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 AC002504.1-201ENST00000438281 691 ntBASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42BPAQ5VT25 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms