Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH13P55290 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH13P55290 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH13P55290 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 AC233702.7-202ENST00000582941 211 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AC012511.1-201ENST00000608140 449 ntBASIC6.28□□□□□ -1.4
CDH13P55290 U1.41-201ENST00000617626 165 ntBASIC6.28□□□□□ -1.4
CDH13P55290 RAB28P4-201ENST00000622233 665 ntBASIC6.28□□□□□ -1.4
CDH13P55290 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 AC006600.2-201ENST00000624834 2506 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.27□□□□□ -1.4
CDH13P55290 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 ZNF402P-201ENST00000404435 3100 ntBASIC6.27□□□□□ -1.41
CDH13P55290 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 OR7A2P-201ENST00000304105 930 ntBASIC6.27□□□□□ -1.41
CDH13P55290 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDH13P55290 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDH13P55290 AC240504.1-201ENST00000395709 845 ntBASIC6.27□□□□□ -1.41
CDH13P55290 AL139100.1-201ENST00000408001 498 ntBASIC6.27□□□□□ -1.41
CDH13P55290 CASKP1-201ENST00000412870 582 ntBASIC6.27□□□□□ -1.41
CDH13P55290 MRPS21P5-201ENST00000417885 231 ntBASIC6.27□□□□□ -1.41
CDH13P55290 RFESDP1-201ENST00000422350 461 ntBASIC6.27□□□□□ -1.41
CDH13P55290 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 TRGV7-201ENST00000427089 353 ntBASIC6.27□□□□□ -1.41
CDH13P55290 E2F6P1-201ENST00000428850 745 ntBASIC6.27□□□□□ -1.41
CDH13P55290 E2F6P3-201ENST00000441743 743 ntBASIC6.27□□□□□ -1.41
CDH13P55290 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 AP002371.1-201ENST00000463604 433 ntBASIC6.27□□□□□ -1.41
CDH13P55290 RPS3AP49-201ENST00000472161 790 ntBASIC6.27□□□□□ -1.41
CDH13P55290 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 AC131392.1-201ENST00000506490 633 ntBASIC6.27□□□□□ -1.41
CDH13P55290 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH13P55290 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 AC026956.1-201ENST00000558741 396 ntBASIC6.27□□□□□ -1.41
CDH13P55290 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 AC100832.2-201ENST00000582080 776 ntBASIC6.27□□□□□ -1.41
CDH13P55290 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 AC024589.2-201ENST00000605642 1294 ntBASIC6.27□□□□□ -1.41
CDH13P55290 AC023206.1-201ENST00000605824 298 ntBASIC6.27□□□□□ -1.41
CDH13P55290 AC097641.3-201ENST00000613523 464 ntBASIC6.27□□□□□ -1.41
CDH13P55290 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH13P55290 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CDH13P55290 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH13P55290 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH13P55290 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 AC110373.1-201ENST00000505994 3505 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AP003486.1-201ENST00000525716 3994 ntBASIC6.26□□□□□ -1.41
CDH13P55290 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDH13P55290 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CDH13P55290 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH13P55290 AC068769.1-201ENST00000474767 2426 ntBASIC6.26□□□□□ -1.41
CDH13P55290 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH13P55290 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH13P55290 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 FDPSP5-201ENST00000399474 1057 ntBASIC6.26□□□□□ -1.41
CDH13P55290 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH13P55290 TMA16P2-201ENST00000413187 601 ntBASIC6.26□□□□□ -1.41
CDH13P55290 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH13P55290 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH13P55290 ELOBP4-201ENST00000423418 296 ntBASIC6.26□□□□□ -1.41
CDH13P55290 BX119904.3-201ENST00000428194 957 ntBASIC6.26□□□□□ -1.41
CDH13P55290 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDH13P55290 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH13P55290 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH13P55290 AL158214.1-201ENST00000444423 404 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AL356133.1-201ENST00000444762 372 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AC092967.1-201ENST00000449016 481 ntBASIC6.26□□□□□ -1.41
CDH13P55290 CCNJP1-201ENST00000450600 1149 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH13P55290 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH13P55290 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH13P55290 AL133372.1-201ENST00000493565 745 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AC112184.1-201ENST00000505179 312 ntBASIC6.26□□□□□ -1.41
CDH13P55290 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH13P55290 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms