Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL445647.2-201ENST00000615170 130 ntBASIC7.05□□□□□ -1.28
VCPP55072 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.05□□□□□ -1.28
VCPP55072 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
VCPP55072 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VCPP55072 Z97989.1-201ENST00000531702 2421 ntBASIC7.05□□□□□ -1.28
VCPP55072 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.04□□□□□ -1.28
VCPP55072 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
VCPP55072 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
VCPP55072 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 WBP11P1-201ENST00000562560 1931 ntBASIC7.04□□□□□ -1.28
VCPP55072 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 OR2M1P-201ENST00000318104 951 ntBASIC7.04□□□□□ -1.28
VCPP55072 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VCPP55072 RNA5SP198-201ENST00000410376 127 ntBASIC7.04□□□□□ -1.28
VCPP55072 RPS21P8-201ENST00000413365 247 ntBASIC7.04□□□□□ -1.28
VCPP55072 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.04□□□□□ -1.28
VCPP55072 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.04□□□□□ -1.28
VCPP55072 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.04□□□□□ -1.28
VCPP55072 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 PFN1P11-201ENST00000445829 389 ntBASIC7.04□□□□□ -1.28
VCPP55072 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.04□□□□□ -1.28
VCPP55072 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.04□□□□□ -1.28
VCPP55072 SNX18P23-201ENST00000510867 677 ntBASIC7.04□□□□□ -1.28
VCPP55072 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.04□□□□□ -1.28
VCPP55072 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.04□□□□□ -1.28
VCPP55072 AP004607.6-201ENST00000525033 1202 ntBASIC7.04□□□□□ -1.28
VCPP55072 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 AC090115.2-201ENST00000548060 883 ntBASIC7.04□□□□□ -1.28
VCPP55072 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.04□□□□□ -1.28
VCPP55072 OR7A8P-201ENST00000595427 913 ntBASIC7.04□□□□□ -1.28
VCPP55072 AC067773.1-201ENST00000603284 1094 ntBASIC7.04□□□□□ -1.28
VCPP55072 AL359704.2-201ENST00000604335 521 ntBASIC7.04□□□□□ -1.28
VCPP55072 AL590032.1-201ENST00000604920 252 ntBASIC7.04□□□□□ -1.28
VCPP55072 AC010333.3-201ENST00000615100 402 ntBASIC7.04□□□□□ -1.28
VCPP55072 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.04□□□□□ -1.28
VCPP55072 AL354718.1-201ENST00000619764 589 ntBASIC7.04□□□□□ -1.28
VCPP55072 RAB28P4-201ENST00000622233 665 ntBASIC7.04□□□□□ -1.28
VCPP55072 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 AC009120.2-204ENST00000621548 2032 ntBASIC7.04□□□□□ -1.28
VCPP55072 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 AC104966.1-201ENST00000467010 1464 ntBASIC7.04□□□□□ -1.28
VCPP55072 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VCPP55072 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VCPP55072 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.04□□□□□ -1.28
VCPP55072 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 AC007485.2-201ENST00000623493 1667 ntBASIC7.03□□□□□ -1.28
VCPP55072 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 ZNF806-201ENST00000438300 1774 ntBASIC7.03□□□□□ -1.28
VCPP55072 AC022905.1-201ENST00000503430 3048 ntBASIC7.03□□□□□ -1.28
VCPP55072 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.03□□□□□ -1.28
VCPP55072 PPIAP26-201ENST00000377951 522 ntBASIC7.03□□□□□ -1.28
VCPP55072 YWHAZP4-201ENST00000392459 708 ntBASIC7.03□□□□□ -1.28
VCPP55072 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.03□□□□□ -1.28
VCPP55072 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.03□□□□□ -1.28
VCPP55072 RN7SL39P-201ENST00000462264 297 ntBASIC7.03□□□□□ -1.28
VCPP55072 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.03□□□□□ -1.28
VCPP55072 SNORA74.1-201ENST00000516320 180 ntBASIC7.03□□□□□ -1.28
VCPP55072 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.03□□□□□ -1.28
VCPP55072 SNRPCP6-201ENST00000528310 210 ntBASIC7.03□□□□□ -1.28
VCPP55072 AC007068.2-201ENST00000543168 395 ntBASIC7.03□□□□□ -1.28
VCPP55072 NANOGNBP2-201ENST00000544753 553 ntBASIC7.03□□□□□ -1.28
VCPP55072 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.03□□□□□ -1.28
VCPP55072 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.03□□□□□ -1.28
VCPP55072 SETP3-201ENST00000581726 813 ntBASIC7.03□□□□□ -1.28
VCPP55072 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.03□□□□□ -1.28
VCPP55072 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.03□□□□□ -1.28
VCPP55072 AL096712.1-201ENST00000614561 159 ntBASIC7.03□□□□□ -1.28
VCPP55072 AC061999.1-201ENST00000624454 177 ntBASIC7.03□□□□□ -1.28
VCPP55072 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VCPP55072 SNORA16A-202ENST00000628458 135 ntBASIC7.03□□□□□ -1.28
VCPP55072 AC099654.11-201ENST00000638857 294 ntBASIC7.03□□□□□ -1.28
VCPP55072 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms