Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC112492.2-201ENST00000432774 1030 ntBASIC6.77□□□□□ -1.33
LHX1P48742 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.77□□□□□ -1.33
LHX1P48742 AL354893.1-201ENST00000433735 348 ntBASIC6.77□□□□□ -1.33
LHX1P48742 SUMO2P8-201ENST00000434672 286 ntBASIC6.77□□□□□ -1.33
LHX1P48742 AC094019.1-201ENST00000434678 472 ntBASIC6.77□□□□□ -1.33
LHX1P48742 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 AL645936.1-201ENST00000441979 518 ntBASIC6.77□□□□□ -1.33
LHX1P48742 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.77□□□□□ -1.33
LHX1P48742 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.77□□□□□ -1.33
LHX1P48742 CCNJP2-201ENST00000457810 1163 ntBASIC6.77□□□□□ -1.33
LHX1P48742 CTSLP6-201ENST00000458273 1002 ntBASIC6.77□□□□□ -1.33
LHX1P48742 RN7SL326P-201ENST00000477493 296 ntBASIC6.77□□□□□ -1.33
LHX1P48742 AC021006.1-201ENST00000489849 553 ntBASIC6.77□□□□□ -1.33
LHX1P48742 RNA5SP206-201ENST00000516703 121 ntBASIC6.77□□□□□ -1.33
LHX1P48742 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.77□□□□□ -1.33
LHX1P48742 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LHX1P48742 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 AC002519.2-203ENST00000567043 837 ntBASIC6.77□□□□□ -1.33
LHX1P48742 MIR4271-201ENST00000582451 67 ntBASIC6.77□□□□□ -1.33
LHX1P48742 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.77□□□□□ -1.33
LHX1P48742 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 AC009950.2-201ENST00000636548 183 ntBASIC6.77□□□□□ -1.33
LHX1P48742 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.77□□□□□ -1.33
LHX1P48742 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LHX1P48742 RNA5SP279-201ENST00000365513 117 ntBASIC6.76□□□□□ -1.33
LHX1P48742 AC008171.1-201ENST00000395058 200 ntBASIC6.76□□□□□ -1.33
LHX1P48742 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.76□□□□□ -1.33
LHX1P48742 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.76□□□□□ -1.33
LHX1P48742 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 IGLV3-4-201ENST00000432300 244 ntBASIC6.76□□□□□ -1.33
LHX1P48742 RPSAP40-201ENST00000442343 891 ntBASIC6.76□□□□□ -1.33
LHX1P48742 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LHX1P48742 AC068491.1-201ENST00000449539 1241 ntBASIC6.76□□□□□ -1.33
LHX1P48742 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.76□□□□□ -1.33
LHX1P48742 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 RN7SL254P-201ENST00000460609 284 ntBASIC6.76□□□□□ -1.33
LHX1P48742 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 OR9A1P-202ENST00000484361 945 ntBASIC6.76□□□□□ -1.33
LHX1P48742 NPM1P27-201ENST00000502784 830 ntBASIC6.76□□□□□ -1.33
LHX1P48742 OR4D12P-201ENST00000509361 911 ntBASIC6.76□□□□□ -1.33
LHX1P48742 SNX18P25-201ENST00000510539 758 ntBASIC6.76□□□□□ -1.33
LHX1P48742 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.76□□□□□ -1.33
LHX1P48742 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.76□□□□□ -1.33
LHX1P48742 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.76□□□□□ -1.33
LHX1P48742 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 AC012254.5-201ENST00000623573 478 ntBASIC6.76□□□□□ -1.33
LHX1P48742 AP001052.1-201ENST00000626421 99 ntBASIC6.76□□□□□ -1.33
LHX1P48742 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
LHX1P48742 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
LHX1P48742 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LHX1P48742 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LHX1P48742 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.76□□□□□ -1.33
LHX1P48742 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.75□□□□□ -1.33
LHX1P48742 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 SALL4P7-201ENST00000555779 3120 ntBASIC6.75□□□□□ -1.33
LHX1P48742 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 CUBNP3-201ENST00000457461 1784 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms