Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL136531.3-201ENST00000624378 3658 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL354707.3-201ENST00000427308 331 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC112492.2-201ENST00000432774 1030 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC094019.1-201ENST00000434678 472 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 OR52I1-201ENST00000450052 1050 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 Z83838.1-202ENST00000456225 839 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC089999.1-201ENST00000460336 374 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 RN7SL705P-201ENST00000481678 294 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 SNX18P24-201ENST00000505249 671 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC021269.1-201ENST00000526860 705 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 RN7SL366P-201ENST00000577957 292 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL359704.2-201ENST00000604335 521 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 RPL21P136-201ENST00000605378 396 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AL138960.2-201ENST00000625145 535 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC073488.6-201ENST00000632293 754 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 OR7E91P-202ENST00000642062 1198 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 AC104966.1-201ENST00000467010 1464 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-DOAP06340 BX322650.1-201ENST00000332359 2143 ntBASIC7.6□□□□□ -1.19
HLA-DOAP06340 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HLA-DOAP06340 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 CYCSP52-201ENST00000422857 310 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 KCTD9P1-201ENST00000430462 1167 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 IGLV3-4-201ENST00000432300 244 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC010240.2-201ENST00000445363 1205 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC009963.3-201ENST00000458090 486 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 RN7SL369P-201ENST00000477138 299 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 RPL12P31-201ENST00000478433 450 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 RN7SL714P-201ENST00000487050 298 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 RN7SL104P-201ENST00000498686 293 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC091965.3-201ENST00000506236 208 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 KHDC1P1-201ENST00000511053 508 ntBASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-DOAP06340 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms