Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC104339.1-201ENST00000465478 348 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC005017.1-201ENST00000482002 490 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC009729.1-201ENST00000548873 1133 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AL356986.1-201ENST00000604085 341 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AL683826.1-201ENST00000624104 627 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC010325.3-201ENST00000641084 394 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AL121936.2-201ENST00000641935 662 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AL117378.2-201ENST00000622916 1337 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 OR56A4-201ENST00000330728 1209 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 RNA5SP232-201ENST00000364144 119 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 VN1R20P-201ENST00000425215 966 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC022415.1-202ENST00000486612 523 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 H3F3AP3-201ENST00000497682 407 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 SNORA74.1-201ENST00000516320 180 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 OR1E3-201ENST00000575608 948 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 RN7SL230P-201ENST00000580835 303 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AL359704.2-201ENST00000604335 521 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AP001885.1-201ENST00000621658 558 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 MIR6806-201ENST00000622141 64 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 AC114546.4-201ENST00000624413 369 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 API5P1-201ENST00000424316 1510 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 PARP4P1-201ENST00000435945 2337 ntBASIC7.66□□□□□ -1.18
CLIP2Q9UDT6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC007114.2-201ENST00000576014 4281 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AL354893.1-201ENST00000433735 348 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 H3F3AP5-201ENST00000475267 429 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC112484.3-201ENST00000505910 329 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AL133399.1-201ENST00000527476 298 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AP002370.1-201ENST00000528055 1602 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms