Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 NAP1L4P2-201ENST00000425958 899 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC079807.1-201ENST00000429993 481 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 OR4D12P-201ENST00000509361 911 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 SNX18P25-201ENST00000510539 758 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC090616.1-201ENST00000583895 447 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC020765.1-201ENST00000604296 328 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC073046.2-201ENST00000604756 527 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 TCL6_3.1-201ENST00000619064 137 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 AL132640.3-201ENST00000630473 177 ntBASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.7□□□□□ -1.5
KIAA1549Q9HCM3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AL359885.1-201ENST00000415786 903 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 PNKDP1-201ENST00000435914 430 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AP004609.2-201ENST00000532177 190 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC011497.2-201ENST00000600255 639 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 SNX18P12-201ENST00000624821 759 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 TMEM75-201ENST00000624314 2165 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC007406.5-201ENST00000570140 3170 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AL050335.1-201ENST00000396909 869 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CYP4F30P-202ENST00000420048 405 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC066692.1-201ENST00000421721 457 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 RPS29P14-201ENST00000431518 171 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC005017.1-201ENST00000482002 490 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 RN7SKP288-201ENST00000516227 268 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 AC062022.1-201ENST00000451026 1684 ntBASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KIAA1549Q9HCM3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PABPC1P8-201ENST00000452851 2086 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms