Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PUDPP1-201ENST00000421058 495 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 PPIL1P1-201ENST00000423936 499 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 RPL31P54-201ENST00000429803 370 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 USP9YP16-201ENST00000430287 407 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 OR5M13P-201ENST00000433944 937 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 XKRYP5-201ENST00000449659 483 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 RPL31P15-201ENST00000449770 338 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 USP9YP23-201ENST00000455085 407 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 WBP1LP1-201ENST00000460451 896 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 RPS27P12-201ENST00000464146 258 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 RN7SL370P-201ENST00000470869 295 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 snoZ278.1-201ENST00000517059 112 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC107952.1-201ENST00000524200 376 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC087393.3-201ENST00000584971 166 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC006116.10-201ENST00000591836 581 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 VN1R107P-201ENST00000601784 209 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC004908.2-201ENST00000609090 574 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 AL132765.2-201ENST00000610812 351 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 OR52B5P-202ENST00000641118 1110 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 IARS2P1-201ENST00000508226 3173 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 MAPK10-301ENST00000641313 2482 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC105342.1-201ENST00000378334 6848 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AL137918.1-201ENST00000624542 1922 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AL133384.2-201ENST00000623755 2954 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 MAPK10-316ENST00000641430 2285 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 HERC2P8-202ENST00000564334 3705 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-28P-201ENST00000383861 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-27P-201ENST00000383869 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-1-201ENST00000383925 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNVU1-18-201ENST00000384010 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-2-201ENST00000384278 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-4-201ENST00000384659 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU1-3-201ENST00000384782 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RPS26P38-201ENST00000414476 348 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC069157.1-201ENST00000421749 137 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC018630.2-202ENST00000422992 927 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AL589794.1-201ENST00000424971 390 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC018644.1-201ENST00000429934 551 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 VDAC2P3-201ENST00000430995 828 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 WBP1LP7-201ENST00000437905 363 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC108039.2-201ENST00000440214 359 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AL133480.2-201ENST00000456723 487 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 NTAN1P2-201ENST00000515730 940 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 RNU6-794P-201ENST00000517261 64 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 OR10Y1P-201ENST00000528485 974 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 CBX3P5-201ENST00000552017 521 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms