Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 AL713922.1-201ENST00000416477 747 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 GTF3AP1-201ENST00000416942 1004 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 MARK2P12-201ENST00000420129 585 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 AC093155.2-201ENST00000420734 937 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 AC016908.1-201ENST00000442571 1219 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 AL355355.1-201ENST00000442900 793 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 AP006222.1-205ENST00000450734 457 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 RPSAP39-201ENST00000467439 883 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 AC124945.1-201ENST00000485133 188 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 RPL7L1P4-201ENST00000513004 707 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 CUBNP3-201ENST00000457461 1784 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 RN7SKP293-201ENST00000411389 296 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC245096.1-201ENST00000413104 546 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 BX323845.3-201ENST00000428215 527 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC010547.6-201ENST00000571789 193 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 AL359704.2-201ENST00000604335 521 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 AC022106.1-201ENST00000612834 766 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 AL049767.1-202ENST00000637826 242 ntBASIC7.67□□□□□ -1.18
SNED1Q8TER0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.67□□□□□ -1.18
SNED1Q8TER0 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNED1Q8TER0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 RNU1-46P-201ENST00000384425 164 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 MIR541-201ENST00000401360 84 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AL023284.3-201ENST00000407767 334 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC064862.4-201ENST00000442180 334 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 GEMIN2P1-201ENST00000454246 752 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC022206.1-201ENST00000495947 347 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC008429.4-201ENST00000521201 182 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC007225.2-201ENST00000562529 256 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC233702.7-202ENST00000582941 211 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC015818.6-201ENST00000584274 634 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AL008723.3-201ENST00000608926 449 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 MIR7159-201ENST00000620587 66 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AC022325.1-201ENST00000502748 2199 ntBASIC7.66□□□□□ -1.18
SNED1Q8TER0 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.66□□□□□ -1.18
SNED1Q8TER0 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNED1Q8TER0 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms