Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AC092032.1-201ENST00000603090 165 ntBASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AL031777.2-201ENST00000611953 196 ntBASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AC106782.7-201ENST00000624024 418 ntBASIC4.72□□□□□ -1.65
NUP35Q8NFH5 AC133555.5-201ENST00000624430 418 ntBASIC4.72□□□□□ -1.65
NUP35Q8NFH5 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 MAPK10-350ENST00000641777 965 ntBASIC4.72□□□□□ -1.65
NUP35Q8NFH5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP35Q8NFH5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NUP35Q8NFH5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RNA5SP453-201ENST00000362503 119 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC009506.2-201ENST00000420635 840 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 CYP4F34P-201ENST00000425951 481 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RPS10P21-201ENST00000430654 475 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RPS3AP38-201ENST00000435889 763 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RPS4XP19-201ENST00000460237 736 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RPSAP48-201ENST00000466509 889 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RPL7AP56-201ENST00000476420 791 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 TAAR3P-202ENST00000481759 1025 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 ST13P12-201ENST00000508958 1094 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC117383.2-201ENST00000514722 322 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 BCAS2P1-201ENST00000528022 632 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RN7SL25P-201ENST00000583862 260 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AP001120.4-201ENST00000590231 108 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC006116.6-201ENST00000593258 1103 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL136139.1-201ENST00000605568 222 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL008723.3-201ENST00000608926 449 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC073857.1-201ENST00000625082 1054 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC026108.1-201ENST00000635444 547 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC012078.1-201ENST00000405035 1646 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 SAGE3P-201ENST00000619800 1635 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LINC01808-203ENST00000641932 1643 ntBASIC4.71□□□□□ -1.66
NUP35Q8NFH5 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP35Q8NFH5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 AP001541.1-201ENST00000623322 1904 ntBASIC4.7□□□□□ -1.66
NUP35Q8NFH5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
NUP35Q8NFH5 AC016745.2-201ENST00000608834 3443 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms