Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 BX005266.3-201ENST00000443013 1075 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MTND6P5-201ENST00000448266 512 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 NANOGNBP1-201ENST00000448444 480 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PGA5-202ENST00000451616 971 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC079841.1-201ENST00000481228 950 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 RN7SL573P-201ENST00000485340 276 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC117522.1-201ENST00000509821 380 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL158819.1-201ENST00000514681 398 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC138466.2-201ENST00000540993 304 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 DYM-207ENST00000578396 755 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PDLIM1P3-201ENST00000582370 599 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC005758.1-201ENST00000586408 625 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL137072.1-201ENST00000603444 466 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC006566.1-201ENST00000608943 513 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC012360.3-201ENST00000610036 3449 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MTCO1P23-201ENST00000415223 1526 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CDY15P-201ENST00000421995 1570 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CDY22P-201ENST00000451423 1554 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC127502.2-201ENST00000602663 2351 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MTND4P23-201ENST00000447723 1363 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-660P-201ENST00000364566 109 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MIR637-201ENST00000385000 99 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL109918.1-202ENST00000406724 436 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 SNORA11C-201ENST00000408532 129 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CBX1P3-201ENST00000413296 527 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL009174.1-201ENST00000426577 416 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC152007.1-201ENST00000428521 224 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC018641.1-201ENST00000435950 796 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 HMGN1P6-201ENST00000438508 291 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MTND4LP16-201ENST00000440828 295 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 IGKV1D-35-201ENST00000442736 271 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL450023.2-201ENST00000453276 545 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC098824.1-201ENST00000453565 980 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 BX248409.1-201ENST00000455497 255 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC096915.1-201ENST00000456185 512 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 RN7SL63P-201ENST00000468228 304 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 PA2G4P4-201ENST00000473864 1182 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC008481.2-201ENST00000483614 531 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ACTG1P20-201ENST00000486001 468 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 RPS4XP15-201ENST00000489210 795 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 RPL7P24-201ENST00000493052 752 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 Y_RNA.702-201ENST00000516843 96 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms