Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 SUMO2P19-201ENST00000518920 295 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AL589863.1-201ENST00000595383 631 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC005828.7-201ENST00000607331 556 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC013268.3-201ENST00000262716 2324 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AL136984.1-201ENST00000607611 1893 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AL731556.1-201ENST00000394628 3711 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 RN7SKP171-201ENST00000364417 303 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 MTND2P12-201ENST00000417560 1252 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 VN1R20P-201ENST00000425215 966 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC106800.3-201ENST00000511389 308 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 RNA5SP206-201ENST00000516703 121 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC073581.1-201ENST00000519036 575 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AP004607.6-201ENST00000525033 1202 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 OR4A41P-201ENST00000533053 928 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC009729.1-201ENST00000548873 1133 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC121758.1-202ENST00000556917 658 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AL008723.3-201ENST00000608926 449 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AL157831.2-201ENST00000564681 3095 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AL117378.2-201ENST00000622916 1337 ntBASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf40Q8IXQ3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC105235.1-201ENST00000623208 1816 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AL031123.3-201ENST00000623345 1837 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC090181.3-201ENST00000624777 1514 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RNA5SP333-201ENST00000363466 118 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RNA5SP334-201ENST00000364825 118 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AL157702.1-201ENST00000398764 426 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RNA5SP198-201ENST00000410376 127 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms