Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OR6C5P-201ENST00000452388 923 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 RNU7-140P-201ENST00000459546 60 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 MTND1P16-201ENST00000465177 898 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 RN7SL368P-201ENST00000473384 277 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC018710.1-201ENST00000506509 158 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 OR5M14P-201ENST00000506803 618 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 MTND6P17-201ENST00000511811 519 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 ARL2BPP2-201ENST00000550907 489 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AL109628.2-201ENST00000554037 201 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC090515.3-201ENST00000560431 315 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 BNIP3P22-201ENST00000593399 556 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC012511.1-201ENST00000608140 449 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 MIR8075-201ENST00000614354 80 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AL391261.1-201ENST00000555712 1479 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 AC022306.1-201ENST00000560489 1562 ntBASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SCUBE3Q8IX30 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC117382.2-201ENST00000564748 3151 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 RN7SKP48-201ENST00000365031 328 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 RNU6-907P-201ENST00000390924 102 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 TDGF1P4-201ENST00000401555 520 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 NRBF2P2-201ENST00000413087 861 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 OR5AW1P-201ENST00000426334 1006 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 MTCYBP6-201ENST00000441810 138 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 MTCO3P11-201ENST00000455103 774 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 PNPLA4P1-201ENST00000458328 305 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 OR52A4P-201ENST00000472867 958 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 RN7SL563P-201ENST00000481233 298 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 ATP1B1P1-201ENST00000509767 915 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 GAPDHP44-201ENST00000513513 1007 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AP000662.1-201ENST00000530952 487 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 NPIPB14P-203ENST00000532298 987 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AP005901.5-201ENST00000545779 1796 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC138761.2-201ENST00000583878 343 ntBASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.67□□□□□ -1.02
SCUBE3Q8IX30 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms