Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR5AC4P-202ENST00000642086 985 ntBASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 AL445250.1-203ENST00000641829 1535 ntBASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
TRIM48Q8IWZ4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC061975.5-201ENST00000584928 1441 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 NCOA4P3-201ENST00000513203 1877 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RNU6-1017P-201ENST00000363613 106 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RN7SKP28-201ENST00000364770 305 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 FAM204BP-201ENST00000369171 701 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RNU6-354P-201ENST00000383862 107 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RNU6-610P-201ENST00000384264 107 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RNU1-56P-201ENST00000391303 164 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 GAPDHP69-201ENST00000425504 1008 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 VN1R108P-201ENST00000431580 830 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 FTLP17-201ENST00000432567 525 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC009518.3-201ENST00000438972 253 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 ARL5AP3-201ENST00000439327 386 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 SOCS5P1-201ENST00000440415 949 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 Z99127.2-201ENST00000441426 334 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL355355.1-201ENST00000442900 793 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RSL24D1P3-201ENST00000449255 495 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RPL31P20-201ENST00000449593 360 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL133480.2-201ENST00000456723 487 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 BX323845.2-201ENST00000458382 234 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RPS16P9-201ENST00000477220 427 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RN7SL88P-201ENST00000480166 299 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RN7SL797P-201ENST00000486314 297 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RNA5SP96-201ENST00000516041 107 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RBMS2P1-201ENST00000525031 1226 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 PHBP2-201ENST00000532859 806 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC110760.3-201ENST00000598794 467 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC008536.1-201ENST00000602872 669 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC069304.3-201ENST00000603938 1084 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC021851.1-201ENST00000608537 1082 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL161420.1-201ENST00000619393 264 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC012629.3-201ENST00000623397 328 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC006453.3-201ENST00000635891 377 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 AC097634.1-201ENST00000604491 2467 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 UGT2B25P-201ENST00000511504 1586 ntBASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms