Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 RANP6-201ENST00000413691 644 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SLC20A1P1-201ENST00000413906 956 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AL357078.2-201ENST00000416486 427 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 GAPDHP57-201ENST00000424400 585 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 GTF3AP6-201ENST00000432585 986 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AL020997.1-201ENST00000446554 349 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 MEF2AP1-201ENST00000454867 863 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 RBBP4P1-201ENST00000502424 1276 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SCARNA1-201ENST00000517138 166 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 NPIPB14P-203ENST00000532298 987 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SYPL1P2-201ENST00000582878 727 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC087575.1-201ENST00000585087 229 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AL589863.1-201ENST00000595383 631 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SNORD96A-201ENST00000606577 79 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC090772.4-201ENST00000623599 362 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC073488.6-201ENST00000632293 754 ntBASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
OTOP1Q7RTM1 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL034417.4-202ENST00000642135 2236 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 CCDC162P-202ENST00000368966 6751 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC097634.1-201ENST00000604491 2467 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 RN7SKP271-201ENST00000410528 320 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC066692.1-201ENST00000421721 457 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 FCF1P6-201ENST00000456841 595 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC006539.1-201ENST00000481419 501 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 HAUS1P1-201ENST00000505275 832 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC027369.2-201ENST00000528030 440 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 MTND5P21-201ENST00000531961 522 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC016144.1-201ENST00000548175 1087 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 CYCSP38-201ENST00000559840 322 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC026898.1-201ENST00000586404 571 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC013244.1-201ENST00000604279 193 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC097504.2-201ENST00000608088 454 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AL049777.1-201ENST00000622740 518 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 AC097520.1-201ENST00000624435 385 ntBASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.72□□□□□ -1.17
OTOP1Q7RTM1 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms