Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 CXADRP1-201ENST00000398098 1095 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC068491.1-201ENST00000449539 1241 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 CTSLP6-201ENST00000458273 1002 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 RN7SL362P-201ENST00000494228 267 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC122718.2-201ENST00000505325 591 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC023968.1-201ENST00000560719 475 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AL356986.1-201ENST00000604085 341 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AC018690.1-201ENST00000608144 626 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 CXADRP3-202ENST00000617265 1100 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AL122023.1-201ENST00000622847 530 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 AL121936.2-201ENST00000641935 662 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 CASC19-274ENST00000642018 970 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 TMCC1P1-201ENST00000518897 1980 ntBASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3CQ6NXT2 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZNF402P-201ENST00000404435 3100 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 RNA5SP77-201ENST00000365394 120 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 RNU6-316P-201ENST00000391027 107 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 RPL21P50-201ENST00000417698 477 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AL139158.1-201ENST00000424719 340 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 MED28P4-201ENST00000433137 572 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 OR2L9P-201ENST00000444456 913 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC093166.3-201ENST00000448785 303 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 H3F3AP5-201ENST00000475267 429 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 OR7E22P-201ENST00000478335 1035 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC091874.2-201ENST00000505889 720 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 Vault.2-201ENST00000516519 98 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC008055.1-201ENST00000547032 609 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC025171.4-201ENST00000607250 1047 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC005393.1-201ENST00000617916 584 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 MIR6085-201ENST00000618314 110 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AL683826.1-201ENST00000624104 627 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AC063952.1-203ENST00000634410 658 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 AP003486.1-201ENST00000525716 3994 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.03□□□□□ -1.44
H3F3CQ6NXT2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3F3CQ6NXT2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms