Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 IGLV3-4-201ENST00000432300 244 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC115223.1-201ENST00000466377 870 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 SAA3P-201ENST00000533267 365 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC106785.4-201ENST00000569492 412 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AL663061.1-201ENST00000416625 580 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 NDUFS5P5-201ENST00000437256 321 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 RN7SL643P-201ENST00000471845 291 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 WDR95P-201ENST00000425638 1542 ntBASIC6.22□□□□□ -1.41
RIF1Q5UIP0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 RNU1-134P-201ENST00000362935 165 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 HMGB1P20-201ENST00000402555 677 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AL807761.1-201ENST00000417622 171 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC008953.1-201ENST00000497334 318 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC074087.1-201ENST00000512059 724 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AL035422.2-201ENST00000603059 565 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC090510.2-201ENST00000617465 629 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AL445670.1-201ENST00000618889 801 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 CU639417.4-201ENST00000623928 207 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 AC021766.1-201ENST00000624404 741 ntBASIC6.21□□□□□ -1.41
RIF1Q5UIP0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
RIF1Q5UIP0 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 AL022323.4-201ENST00000623980 13120 ntBASIC6.21□□□□□ -1.42
RIF1Q5UIP0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 TRIM60P16-201ENST00000444048 694 ntBASIC6.21□□□□□ -1.42
RIF1Q5UIP0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 UBA52P7-201ENST00000486088 380 ntBASIC6.21□□□□□ -1.42
RIF1Q5UIP0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 AL512310.9-201ENST00000553311 948 ntBASIC6.21□□□□□ -1.42
RIF1Q5UIP0 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RIF1Q5UIP0 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC125238.2-201ENST00000430003 1440 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms