Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC096922.1-201ENST00000461635 651 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 RN7SL392P-201ENST00000473024 299 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 RPS17P11-201ENST00000474297 293 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 RBBP4P1-201ENST00000502424 1276 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 TECRP2-201ENST00000503270 928 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC010376.1-201ENST00000522101 334 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AP003066.2-201ENST00000529375 555 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AP002004.1-206ENST00000532441 876 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.3□□□□□ -1.4
NKX6-1P78426 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AL049838.1-201ENST00000563647 981 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 ULK4P2-202ENST00000564187 492 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 RPS7P1-201ENST00000571702 585 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC090666.1-201ENST00000578241 445 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 CBX3P2-202ENST00000583365 535 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC008507.2-201ENST00000588402 1176 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC006116.5-201ENST00000591936 559 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC124016.2-201ENST00000610058 665 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC126544.2-201ENST00000625174 749 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC073488.2-201ENST00000631903 751 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AL590396.3-201ENST00000636334 300 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC009220.2-201ENST00000489759 1751 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC005614.1-201ENST00000598952 3653 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NKX6-1P78426 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX6-1P78426 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX6-1P78426 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.29□□□□□ -1.4
NKX6-1P78426 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.29□□□□□ -1.4
NKX6-1P78426 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX6-1P78426 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX6-1P78426 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 OR11H13P-201ENST00000359695 979 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 RN7SKP174-201ENST00000363803 330 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX6-1P78426 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NKX6-1P78426 ARSFP1-201ENST00000398758 477 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 CNN3P1-201ENST00000401596 935 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 AL391422.1-201ENST00000402155 436 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 RPL26P37-201ENST00000411983 438 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.29□□□□□ -1.4
NKX6-1P78426 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.29□□□□□ -1.4
NKX6-1P78426 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 AL672212.1-201ENST00000422246 400 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX6-1P78426 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX6-1P78426 RPL5P6-201ENST00000425640 886 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX6-1P78426 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX6-1P78426 RPL5P4-201ENST00000434805 886 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 AC006994.1-201ENST00000438212 839 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 PMS2P11-201ENST00000451831 574 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 AC005517.1-201ENST00000452091 489 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.29□□□□□ -1.4
NKX6-1P78426 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 AL022319.1-201ENST00000458183 1167 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 AC092691.2-201ENST00000461787 803 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX6-1P78426 AC104982.1-201ENST00000478775 574 ntBASIC6.29□□□□□ -1.4
NKX6-1P78426 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.29□□□□□ -1.4
NKX6-1P78426 RN7SL518P-201ENST00000491887 280 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms