Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.29□□□□□ -1.56
LMO4P61968 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 AC010624.4-201ENST00000597606 1351 ntBASIC5.29□□□□□ -1.56
LMO4P61968 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 AC110597.1-201ENST00000562669 3176 ntBASIC5.28□□□□□ -1.56
LMO4P61968 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 AC105114.1-201ENST00000624795 1862 ntBASIC5.28□□□□□ -1.56
LMO4P61968 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 MAPK10-383ENST00000642032 3390 ntBASIC5.28□□□□□ -1.56
LMO4P61968 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMO4P61968 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMO4P61968 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 RN7SKP275-201ENST00000364626 301 ntBASIC5.28□□□□□ -1.56
LMO4P61968 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMO4P61968 AL023284.3-201ENST00000407767 334 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.28□□□□□ -1.56
LMO4P61968 AL590004.3-202ENST00000445883 451 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.28□□□□□ -1.56
LMO4P61968 AC009963.3-201ENST00000458090 486 ntBASIC5.28□□□□□ -1.56
LMO4P61968 RNU6-775P-201ENST00000459318 96 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.28□□□□□ -1.56
LMO4P61968 RN7SL714P-201ENST00000487050 298 ntBASIC5.28□□□□□ -1.56
LMO4P61968 OR7E99P-201ENST00000505750 922 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC091965.3-201ENST00000506236 208 ntBASIC5.28□□□□□ -1.56
LMO4P61968 OR4D12P-201ENST00000509361 911 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.28□□□□□ -1.56
LMO4P61968 AC021733.2-201ENST00000518830 497 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.28□□□□□ -1.56
LMO4P61968 AC087272.1-201ENST00000523624 533 ntBASIC5.28□□□□□ -1.56
LMO4P61968 IGLV3-6-201ENST00000523937 250 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 AC090115.2-201ENST00000548060 883 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.28□□□□□ -1.56
LMO4P61968 AC073389.3-201ENST00000609434 935 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AL359742.1-201ENST00000622497 540 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC022400.9-201ENST00000623633 273 ntBASIC5.28□□□□□ -1.56
LMO4P61968 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
LMO4P61968 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
LMO4P61968 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LMO4P61968 AL136531.3-201ENST00000624378 3658 ntBASIC5.28□□□□□ -1.56
LMO4P61968 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 MROH3P-201ENST00000435735 2676 ntBASIC5.28□□□□□ -1.56
LMO4P61968 AC009120.2-204ENST00000621548 2032 ntBASIC5.28□□□□□ -1.56
LMO4P61968 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LMO4P61968 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LMO4P61968 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 AC011455.2-201ENST00000599320 3336 ntBASIC5.27□□□□□ -1.57
LMO4P61968 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 259.6 ms