Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC116158.1-201ENST00000560231 2129 ntBASIC7.76□□□□□ -1.17
RHBDL3P58872 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RHBDL3P58872 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RHBDL3P58872 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.75□□□□□ -1.17
RHBDL3P58872 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RHBDL3P58872 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC096537.2-201ENST00000413707 714 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RHBDL3P58872 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 RSL24D1P2-201ENST00000445584 366 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 MGAT2P1-201ENST00000449718 797 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.75□□□□□ -1.17
RHBDL3P58872 SEPT7P6-201ENST00000469999 1143 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC095057.1-201ENST00000507583 168 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC036111.2-201ENST00000533247 901 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.75□□□□□ -1.17
RHBDL3P58872 MIR4502-201ENST00000580432 81 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC020915.5-201ENST00000596836 964 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC005393.1-201ENST00000617916 584 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.75□□□□□ -1.17
RHBDL3P58872 TSHZ2-205ENST00000626626 670 ntBASIC7.75□□□□□ -1.17
RHBDL3P58872 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.75□□□□□ -1.17
RHBDL3P58872 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RHBDL3P58872 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RHBDL3P58872 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
RHBDL3P58872 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RHBDL3P58872 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.74□□□□□ -1.17
RHBDL3P58872 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 AL008638.3-201ENST00000623027 5182 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 NCOA4P2-201ENST00000340589 1813 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.74□□□□□ -1.17
RHBDL3P58872 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.74□□□□□ -1.17
RHBDL3P58872 MIR1282-201ENST00000408865 101 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.74□□□□□ -1.17
RHBDL3P58872 RN7SKP281-201ENST00000410472 352 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 PSMD10P2-201ENST00000432890 672 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.74□□□□□ -1.17
RHBDL3P58872 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC083906.1-201ENST00000509298 406 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 SNORA70.17-201ENST00000516449 133 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC078878.1-201ENST00000539832 958 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 AC023968.1-201ENST00000560719 475 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 BNIP3P7-201ENST00000605641 516 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC7.74□□□□□ -1.17
RHBDL3P58872 MIR6778-201ENST00000617912 73 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 AP001264.1-201ENST00000620602 703 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RHBDL3P58872 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 AC119674.1-204ENST00000641348 1343 ntBASIC7.74□□□□□ -1.17
RHBDL3P58872 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RHBDL3P58872 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RHBDL3P58872 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms